PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA53993.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

NAC

Protein Properties

Length: 295aa MW: 33351.7 Da PI: 5.2912

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA53993.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	143.3	1.3e-44	13	139	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgel 99 pGfrFhPt+eel+ +yL+ v+gkkl++ ++i ++++y ++P dLp+ +k +e+ewyf ++rd+++a+g r+nr+t+ g+Wkatg+d+++ + ++l PKA53993.1 13 PGFRFHPTEEELLEFYLRGAVSGKKLTF-DIIGTLNLYLYDPCDLPALAKIGEREWYFLVPRDRRQANGGRPNRTTEGGFWKATGSDRQIRGAadPRRL 110 9**********************999.99***********888899**********************************998767788 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 +glkktLv+y+grap+g+ktdWvm+eyrl PKA53993.1 111 IGLKKTLVYYRGRAPRGTKTDWVMNEYRL 139 *************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 295 aa Download sequence
MAEDRSGFEL DLPGFRFHPT EEELLEFYLR GAVSGKKLTF DIIGTLNLYL YDPCDLPALA 60 KIGEREWYFL VPRDRRQANG GRPNRTTEGG FWKATGSDRQ IRGAADPRRL IGLKKTLVYY 120 RGRAPRGTKT DWVMNEYRLP AAPNSSCGPN SSMEDIVLCK VYRKATSMKE LEQRAAVEED 180 SRASHGCAAS GTSSDQESFQ RFVYDEENMS MMEEAEPEAR EISTSAVWPE VPLLESSAAK 240 PLPPMAKASR QGPQLPAIQV PIHTSFEWMQ DSLISQLRSP WLDQWSPMYA NLLNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	3e-84	NAC family protein