PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA53969.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | B3 | ||||||||
Protein Properties | Length: 146aa MW: 16720.2 Da PI: 6.1078 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 55.7 | 9.2e-18 | 34 | 127 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 f +++ +s v ++lv+p++f+++ ++++ + + +g++W++++ ++ +r++ GWk+Fv++n+L+ gD ++F+l++++e +++v++++ PKA53969.1 34 FTTIMAKSQVEPPHQLVIPNSFLKDKPLPHAI--LPAIVTCRGKTWDMTYHGNRPLRRFY---GWKKFVEENDLRIGDGCIFELVDDKELKFKVQILDG 127 7889999****************999988665..5677799*********6677777776...**********************99********9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 146 aa Download sequence |
MEHSLSTQES DNNVRNTEEP SVNEIIPLLG IPYFTTIMAK SQVEPPHQLV IPNSFLKDKP 60 LPHAILPAIV TCRGKTWDMT YHGNRPLRRF YGWKKFVEEN DLRIGDGCIF ELVDDKELKF 120 KVQILDGQLP EMFSKLGSAQ KPINID |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G58280.1 | 4e-07 | B3 family protein |