PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA53496.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | ERF | ||||||||
Protein Properties | Length: 185aa MW: 19833.2 Da PI: 7.5111 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.5 | 5.8e-17 | 24 | 73 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +ykGVr ++ +g+Wv+eIr p r +r++lg++ ++e Aa+a++aa ++l+g PKA53496.1 24 QYKGVRMRS-WGSWVSEIRAP-----RhkTRIWLGSYSSPEAAARAYDAAVLCLKG 73 69****998.**********8.....336************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence |
MVKRHSISPS GAGAAAVSGQ QRQQYKGVRM RSWGSWVSEI RAPRHKTRIW LGSYSSPEAA 60 ARAYDAAVLC LKGSSAALNF PDSSLVRPPA AALLSPKSIQ RLAAAAAAAA TPSNTSDHTS 120 AAVSSSLSSE VTETAAVLEE WVEFGAFQSP KFFVDSAMNP FSFFAPTQLA EEFEETEDLR 180 LWSFC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21910.1 | 2e-33 | ERF family protein |