PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA52569.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | ERF | ||||||||
Protein Properties | Length: 244aa MW: 25737 Da PI: 10.1535 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.1 | 1.5e-20 | 35 | 84 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr ++ +gr++AeIrdp gk+ r++lg+f+taeeAa+a++aa+++++g PKA52569.1 35 HFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDAAAREFRG 84 58*******.**********8...557************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MAPREKGSGG GRGAGGAGLE LAISSGGRGN GQEMHFRGVR KRPWGRYAAE IRDPGKKSRV 60 WLGTFDTAEE AARAYDAAAR EFRGSKAKTN FPFTDGYLQS ASPKLAAAGG KAASCSPSSQ 120 SSTVESSSRE IAVAVAVPPM ATPLPPLDLD LIHRGTPRYP FQHFQPGVPA MAQPFFFFGA 180 FGRSEKGAAM SLAGHHRRLA LDLPSGVQSD SDSSSVVDLQ PPSPQAKLRP LDLDLNLPPQ 240 AEIP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44210.1 | 1e-23 | ERF family protein |