PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA52554.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

bZIP

Protein Properties

Length: 347aa MW: 36889.6 Da PI: 6.3152

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA52554.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	69.7	4.7e-22	259	321	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkrerrkq+NRe+ArrsR+RK++e+eeL++kv eL eN++L++ele+l+k ++ l++e+ PKA52554.1 259 ERELKRERRKQSNRESARRSRLRKQQECEELARKVTELNDENSTLRSELEQLQKVCKDLEAEN 321 89*********************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MGSSEDPKTP AKPSNSKPAT ANTPPMASQD PPPTLAYTSD WAASVQAYYG AGAGTAPAFF 60 QPVWGGQPLM PPYGTPIAYS PMYAPAAVYA HPSSTPGMGY PTVDSGKSKS KAALDKSGEG 120 GKATSGSGEE DASQSCGSAT EGSSDTRDES PGIQENSRKR LFNDVAQDGE SSQPSTAALN 180 SNTTCESSYG GRGRATKLPV SAPGRTTLPS PATNLNIGMD IWNAPHGVAP LKVGLNTVIA 240 PVEGGPNGVI AERQWIQDER ELKRERRKQS NRESARRSRL RKQQECEELA RKVTELNDEN 300 STLRSELEQL QKVCKDLEAE NQQIEEELKS IRGSSSKMNG KIYHSSG

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MGSSEDPKTP AKPSNSKPAT ANTPPMASQD PPPTLAYTSD WAASVQAYYG AGAGTAPAFF  60
QPVWGGQPLM PPYGTPIAYS PMYAPAAVYA HPSSTPGMGY PTVDSGKSKS KAALDKSGEG  120
GKATSGSGEE DASQSCGSAT EGSSDTRDES PGIQENSRKR LFNDVAQDGE SSQPSTAALN  180
SNTTCESSYG GRGRATKLPV SAPGRTTLPS PATNLNIGMD IWNAPHGVAP LKVGLNTVIA  240
PVEGGPNGVI AERQWIQDER ELKRERRKQS NRESARRSRL RKQQECEELA RKVTELNDEN  300
STLRSELEQL QKVCKDLEAE NQQIEEELKS IRGSSSKMNG KIYHSSG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	276	282	RRSRLRK
2	276	283	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36730.2	4e-52	bZIP family protein