PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA52065.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | MYB | ||||||||
Protein Properties | Length: 257aa MW: 29192.9 Da PI: 7.5612 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.6 | 1.9e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++ Edell +++ +G g+W++ +++ g+ R+ k+c++rw +yl PKA52065.1 14 KGQWSPAEDELLTSYIRTHGEGNWTSLPKKAGLLRCKKSCRLRWVNYL 61 799*****************************99************97 PP | |||||||
2 | Myb_DNA-binding | 53.5 | 5.5e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T++E++l+++++++lG++ W++Ia++++ gRt++++k++w+++l PKA52065.1 67 RGNITAQEEDLIIRLHALLGNR-WSLIASRLP-GRTDNEIKNYWNTHL 112 7999******************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MGRSPCWSKE GIVKGQWSPA EDELLTSYIR THGEGNWTSL PKKAGLLRCK KSCRLRWVNY 60 LKPDIKRGNI TAQEEDLIIR LHALLGNRWS LIASRLPGRT DNEIKNYWNT HLVKKLKTHG 120 FVFPARPSAV RRGPPPGRRS RSGEGSPAKI YVPKPMRFRP RLPESSGSCS IDHQETISTS 180 ASTPSSTPCH ADEVVDDVLK LVDPNLHCVM GFDFDLDLDS SDFQNWEDDA VLDRVYEEYS 240 QLLRSEEDEA LHPFESH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G16720.1 | 3e-59 | MYB family protein |