PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA51840.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family B3
Protein Properties Length: 268aa    MW: 30762.3 Da    PI: 10.4883
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA51840.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B357.32.9e-18132219196
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                 f+k +++s+v++  +l lp kf+++h  +  +++t++lede+g++ e  +i r+++    l++GWk+F+  ++L++gD ++Fkl++ ++f  ++ +
  PKA51840.1 132 FVKSMVRSHVSSCFWLGLPTKFCKDHLPQ--KEITMVLEDEKGEEREAIYIGRRTG----LSGGWKSFAVHHELEDGDAIIFKLIEPTRF--KIYI 219
                 89************************644..6689***************544444....************************987777..4444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MEAPINSYEE IRRKRVEENV KKLEGFGIAK ISKSLMEVAR SETKLLKIHT SSVSKKMQET  60
SELRRSSRAR NLVPSYSDDV GDIGLRSHIR RRLCDSMGRE YNGRMASYEE RVHAVKKAEM  120
LLSQVASDHP SFVKSMVRSH VSSCFWLGLP TKFCKDHLPQ KEITMVLEDE KGEEREAIYI  180
GRRTGLSGGW KSFAVHHELE DGDAIIFKLI EPTRFKIYIV KAIDGPSKAD EFQTSIVLPS  240
SKQFQDKGPR NKPRNARKRK QRRPRSSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58280.19e-59B3 family protein