PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA51691.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

bHLH

Protein Properties

Length: 722aa MW: 79825.4 Da PI: 4.8043

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA51691.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	19	2.6e-06	575	612	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i ++f eLre++P+ a Kls + Lek+++++ Lq PKA51691.1 575 RQMIQDRFKELREIVPNgA------KLSTEALLEKTIRHMLFLQ 612 77899**********66......**************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 722 aa Download sequence
MGVLLGDLLR RFCVEIGWSY AVFWRAVELQ GRMCFVWEDG FCEQTPGDLA ISRFEAMDLF 60 IKEEKLLCGF GCQKDDRVWT LVHRRMPTQV HGVGDGVVWE AASTRNHQWI LQGNLEEKFA 120 ASMGPLEMND QFLAGIQTIS VIPVLPQGVL QLGSTRLILE DIGFVNLVQQ LFMQSGSVPI 180 SLLSDYNGNS FIPNILLSAA KQPSFNQFRD VEHDANGIPS PSFSGSVPLI KADICRNMSS 240 LAGEKVGSIK DQSSIIEKSR MIRRSKDCLE SFQQFGEGPS WNHCTRAGDE PSTMSSSGKQ 300 IVSDESFRGT DDQMSESNGF VTDNKLQLVS CQNAWWGDSK LVSENAHSSE VVPAAHNSEV 360 LASGDEVRID LQVNSENDLF DMLALNTINS VLDDSIFSFS VDIPTSITQI AGDSFSDFSN 420 DKTACSGLFS EACSDQLLDA IVSQIKPFEK VIPDDAVSCN TSTRSSKYSC HNSPAGFAGS 480 SVPLPSKMLG PIIAKSEIDV GISVTSECIM DRSEGVYYLG DEMFKSQLGQ WGGQDLSVDR 540 DRLSSANCKR VEEAGKLNRK KTRPGENPRP RPKDRQMIQD RFKELREIVP NGAKLSTEAL 600 LEKTIRHMLF LQSVTMHADK LKETGKSKII NKDEGLIMKD NFKGGATWAL EVSDQSTICP 660 IVVEDLKTPR HMLVEANRDV TRMEIFLSLM HLLEPTAGNV ILEGNVCWFQ SGNAESRFVS 720 LQ

Sequence ? help Back to Top

Protein Sequence Length: 722 aa Download sequence

MGVLLGDLLR RFCVEIGWSY AVFWRAVELQ GRMCFVWEDG FCEQTPGDLA ISRFEAMDLF  60
IKEEKLLCGF GCQKDDRVWT LVHRRMPTQV HGVGDGVVWE AASTRNHQWI LQGNLEEKFA  120
ASMGPLEMND QFLAGIQTIS VIPVLPQGVL QLGSTRLILE DIGFVNLVQQ LFMQSGSVPI  180
SLLSDYNGNS FIPNILLSAA KQPSFNQFRD VEHDANGIPS PSFSGSVPLI KADICRNMSS  240
LAGEKVGSIK DQSSIIEKSR MIRRSKDCLE SFQQFGEGPS WNHCTRAGDE PSTMSSSGKQ  300
IVSDESFRGT DDQMSESNGF VTDNKLQLVS CQNAWWGDSK LVSENAHSSE VVPAAHNSEV  360
LASGDEVRID LQVNSENDLF DMLALNTINS VLDDSIFSFS VDIPTSITQI AGDSFSDFSN  420
DKTACSGLFS EACSDQLLDA IVSQIKPFEK VIPDDAVSCN TSTRSSKYSC HNSPAGFAGS  480
SVPLPSKMLG PIIAKSEIDV GISVTSECIM DRSEGVYYLG DEMFKSQLGQ WGGQDLSVDR  540
DRLSSANCKR VEEAGKLNRK KTRPGENPRP RPKDRQMIQD RFKELREIVP NGAKLSTEAL  600
LEKTIRHMLF LQSVTMHADK LKETGKSKII NKDEGLIMKD NFKGGATWAL EVSDQSTICP  660
IVVEDLKTPR HMLVEANRDV TRMEIFLSLM HLLEPTAGNV ILEGNVCWFQ SGNAESRFVS  720
LQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.2	1e-30	bHLH family protein