PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA51655.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

G2-like

Protein Properties

Length: 446aa MW: 50277.9 Da PI: 6.7296

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA51655.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.2	1.4e-31	125	178	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH +Fv+ave+LGG+e+AtPk +l++m+v gL+++hvkSHLQ+YR+ PKA51655.1 125 PRLRWTPELHLSFVHAVERLGGQERATPKLVLQMMNVRGLSIAHVKSHLQMYRS 178 8****************************************************7 PP
2	Myb_DNA-binding	50.2	5.8e-16	126	177	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e+++ +v+av++lGg t+k++ ++m+ g++ ++ks++q+y+ PKA51655.1 126 RLRWTPELHLSFVHAVERLGGQeraTPKLVLQMMNvRGLSIAHVKSHLQMYR 177 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 446 aa Download sequence
MEMTGEKGKE VVEIYDGEGE KSERRGGSCS LHSPSRKKTS TSHELDLNIE VLLEEEINES 60 DEEEDKGCTT EVEERRGEGS SSDNGSSNDG RLSSSKTKGA SEGDGPAAGK RLGPSVRQYV 120 RSKMPRLRWT PELHLSFVHA VERLGGQERA TPKLVLQMMN VRGLSIAHVK SHLQMYRSKK 180 LDSSGQERSA LSAFDLHLRR DHFHDMFYQR AGSYQPFRME NHGGLFRAEN SHQFDHVYSF 240 FQQSHSHQPL NFSNSSFRQE EWDFSQLMAE RPAASIKDVI FKKDDKYSSP HLFSVRDVIN 300 GNDLSRATGR RSRSNQSLSP FMSSFNFSNT NHGGIEPQIE LQYSSFPLML KGEEDSREAK 360 RMRLLIERKA VPDLQLSLSS SSMEKNGVDG RRSCEEGVDD SELSLSLTPP PSRDVQAEFM 420 MKKMGSSKKF GSLELSTTLD LTMSIN

Sequence ? help Back to Top

Protein Sequence Length: 446 aa Download sequence

MEMTGEKGKE VVEIYDGEGE KSERRGGSCS LHSPSRKKTS TSHELDLNIE VLLEEEINES  60
DEEEDKGCTT EVEERRGEGS SSDNGSSNDG RLSSSKTKGA SEGDGPAAGK RLGPSVRQYV  120
RSKMPRLRWT PELHLSFVHA VERLGGQERA TPKLVLQMMN VRGLSIAHVK SHLQMYRSKK  180
LDSSGQERSA LSAFDLHLRR DHFHDMFYQR AGSYQPFRME NHGGLFRAEN SHQFDHVYSF  240
FQQSHSHQPL NFSNSSFRQE EWDFSQLMAE RPAASIKDVI FKKDDKYSSP HLFSVRDVIN  300
GNDLSRATGR RSRSNQSLSP FMSSFNFSNT NHGGIEPQIE LQYSSFPLML KGEEDSREAK  360
RMRLLIERKA VPDLQLSLSS SSMEKNGVDG RRSCEEGVDD SELSLSLTPP PSRDVQAEFM  420
MKKMGSSKKF GSLELSTTLD LTMSIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42660.1	2e-36	G2-like family protein