PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA50675.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

bZIP

Protein Properties

Length: 281aa MW: 30958.9 Da PI: 8.0876

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA50675.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	51.7	1.9e-16	112	163	4	55
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 lkr rrk +NRe+ArrsR+RK+a ++ Le+ v++L +eN +L k+l e +++ PKA50675.1 112 LKRMRRKVSNRESARRSRRRKQAHLADLEQQVDQLRGENASLYKQLTEANQQ 163 8*****************************************9666665554 PP

Sequence ? help Back to Top
Protein Sequence Length: 281 aa Download sequence
MTSIPSSSIS VDTSLSLPEM KSRIIIRMPQ VVLLVVHWQK GKYGLRALFL CFPASVLQLN 60 PNPSTGVQLP SLKPKSIENQ TLGGSSGSDQ SDEESFETEA GPCQQSTDTI NLKRMRRKVS 120 NRESARRSRR RKQAHLADLE QQVDQLRGEN ASLYKQLTEA NQQFTDSVTD NRILKSDVEA 180 LRVKVKMAEN MVARGSLTCS LDHLLQSPIS SSHLLGSLPN FDLQTKAASY LDAPLAGLAN 240 NTGDAAAEEV ETKNGDIRTS VHNLQNRISD DIANFSTQIW P

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	116	132	RRKVSNRESARRSRRRK
2	126	133	RRSRRRKQ
3	128	133	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24800.1	1e-34	bZIP family protein