PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA50499.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | G2-like | ||||||||
Protein Properties | Length: 257aa MW: 28378.9 Da PI: 9.5983 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 107.1 | 9.7e-34 | 18 | 72 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 ++rlrWt+eLHerFv+av+qLGG+e+AtPk +l++m+v+gLt++hvkSHLQkYRl PKA50499.1 18 RQRLRWTNELHERFVDAVSQLGGPERATPKGVLRIMGVQGLTIYHVKSHLQKYRL 72 58****************************************************8 PP | |||||||
2 | Myb_DNA-binding | 62.7 | 7.3e-20 | 20 | 71 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav qlGg+ t+k + r mg +g+t +++ks++qky+ PKA50499.1 20 RLRWTNELHERFVDAVSQLGGPeraTPKGVLRIMGvQGLTIYHVKSHLQKYR 71 89*************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MAQHAGGSNP NNPNASSRQR LRWTNELHER FVDAVSQLGG PERATPKGVL RIMGVQGLTI 60 YHVKSHLQKY RLAKYLPDSS SEGAKVEKKE SGDVLSNIDN STGMQITEAL KLQMEVQKRL 120 HEQLEVQRQL QLRIEAQGKY LKKIIEEQQR LSGGLAPIST GQFPEDKADP STPAPITESS 180 LQGKNKGNLF KSLSFEDSHH APATPESGSL STSPKHERPV KRLRDVDSPK QEDLMLGHHI 240 LESSSSSLFL GSASFSQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01060.1 | 1e-82 | G2-like family protein |