PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA50192.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

G2-like

Protein Properties

Length: 422aa MW: 44972.2 Da PI: 6.7078

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA50192.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88.2	7.9e-28	135	189	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k +++WtpeLH+rFveaveqL G +kA+P++ilelm++++Lt+++++SHLQkYR++ PKA50192.1 135 KVKVDWTPELHRRFVEAVEQL-GVDKAVPSRILELMGIDCLTRHNIASHLQKYRSH 189 5689***************.******************************86 PP
2	Myb_DNA-binding	39.7	1.1e-12	138	187	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e++ ++v+av+qlG + +++I + mg +t+ ++ s++qky+ PKA50192.1 138 VDWTPELHRRFVEAVEQLGVDkaVPSRILELMGiDCLTRHNIASHLQKYR 187 57******************************889**********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
MLAVSLPRAS TPGETVGESA FDFSGDFDID FAELLAGLDG ADDLPDLELD PCEILRADSA 60 AAGGAENLPA EATDGVGAQP SECSEEKVPS DDEILSPGSR EEALAPEVKS ASPDGGGGCR 120 KPAAAKAKGS QGKRKVKVDW TPELHRRFVE AVEQLGVDKA VPSRILELMG IDCLTRHNIA 180 SHLQKYRSHR KHMLAREAEG ASWSHRRHTY GGPAGAGAGG GPAGLKREMS PWLAPAMGFP 240 SPPPPPHHPH HHPHGIQHFC RPLLHVWGHP TVIDQSIAHT WPKHLLPPRP QTTVSSPLPW 300 PVAPHPPLHP PPLGSSWQPQ YPRRFPPPPV PGIPSQPIYR PAGAVQAAVP PPPPPPLPLS 360 KRAVPLTNLQ DAHLSNECID AAIGDVLAQP WLPLPLGLKP PSLEGVMVEL QRQGISNIPP 420 CT

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

MLAVSLPRAS TPGETVGESA FDFSGDFDID FAELLAGLDG ADDLPDLELD PCEILRADSA  60
AAGGAENLPA EATDGVGAQP SECSEEKVPS DDEILSPGSR EEALAPEVKS ASPDGGGGCR  120
KPAAAKAKGS QGKRKVKVDW TPELHRRFVE AVEQLGVDKA VPSRILELMG IDCLTRHNIA  180
SHLQKYRSHR KHMLAREAEG ASWSHRRHTY GGPAGAGAGG GPAGLKREMS PWLAPAMGFP  240
SPPPPPHHPH HHPHGIQHFC RPLLHVWGHP TVIDQSIAHT WPKHLLPPRP QTTVSSPLPW  300
PVAPHPPLHP PPLGSSWQPQ YPRRFPPPPV PGIPSQPIYR PAGAVQAAVP PPPPPPLPLS  360
KRAVPLTNLQ DAHLSNECID AAIGDVLAQP WLPLPLGLKP PSLEGVMVEL QRQGISNIPP  420
CT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20570.1	4e-55	G2-like family protein