PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA49791.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | C2H2 | ||||||||
Protein Properties | Length: 233aa MW: 23361.1 Da PI: 8.3343 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.7 | 0.00019 | 87 | 109 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ Cgk F + L H +H PKA49791.1 87 YKCSVCGKAFASYQALGGHKASH 109 9***********99998888877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MILSEVAAPA TGSEEAAAAS HPVEGWAKRK RSKRPRCFDQ PPTEEEYLAL CLIMLARGGG 60 GGEGGGGGGG GGGSGHHLPP LSSSQSYKCS VCGKAFASYQ ALGGHKASHR KPLSSAAEDG 120 ASSAAASASP GTSAAASCSA GKVHRCSVCQ KTFPTGQALG GHKRCHYDGN ASAAAASSSE 180 ATSSVQKGFD LNIPALADVT LEGGRRCVAG LAAEEEEVQS PLALKKPRFL IPA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27730.1 | 4e-43 | C2H2 family protein |