PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA48892.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | bHLH | ||||||||
Protein Properties | Length: 137aa MW: 15478.3 Da PI: 10.2054 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 44.8 | 2.3e-14 | 2 | 50 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h +Er+RR+++N+ + Lr+l+P + k+ + a+i A+eYIk+Lq PKA48892.1 2 HHISVERNRRKKMNEHLRALRSLMPCF---YVKRGDQASIIGGAIEYIKELQ 50 6889**********************9...9********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 137 aa Download sequence |
MHHISVERNR RKKMNEHLRA LRSLMPCFYV KRGDQASIIG GAIEYIKELQ LLLHSLEAKK 60 QRKGVTGLGA CCNSSVADVE AKIMGSNVIL RVLSKRAPGQ VVKVITVLER HAFEILHLSI 120 SSMEDTVLYS YYMKVLI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06120.1 | 8e-59 | bHLH family protein |