PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA48736.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

VOZ

Protein Properties

Length: 506aa MW: 56483.7 Da PI: 4.8735

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA48736.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	421	2e-129	210	426	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdls 99 pppsafl+ kcalwdc+rp+qgsew+ dycssfhatla+neglpg++pvlrp+gidlkdg+lfaalsak+qgkevgipecegaat+kspwna+elfdls PKA48736.1 210 PPPSAFLRAKCALWDCPRPTQGSEWCPDYCSSFHATLAFNEGLPGMNPVLRPGGIDLKDGPLFAALSAKTQGKEVGIPECEGAATTKSPWNAPELFDLS 308 89*********************************************************************************************** PP VOZ 100 llegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksakg 198 +lege++rewlffdkprrafesgnr+qrslpdysgrgwhesrkqv+ke+gglkrsyymdpqps+++ewhl+eyei+++da+alyrlelklvd+kk k+ PKA48736.1 309 VLEGESLREWLFFDKPRRAFESGNRRQRSLPDYSGRGWHESRKQVVKEYGGLKRSYYMDPQPSNHYEWHLFEYEISNCDACALYRLELKLVDHKKGGKA 407 *********************************************************************************************** PP VOZ 199 kvskdsladlqkklgrlta 217 k + + l+dlq+++ +lta PKA48736.1 408 KSNIELLVDLQQQMDKLTA 426 ***************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 506 aa Download sequence
MSKGCRSASH ALFKDKAKNR VDDLQCMFSD LLSARRENRT GDVAVLEEQV NQMLREWKAE 60 LNEASPATSA LVGNSRVSSD LSSEIRRLLQ LGEEDDDATS KLADHSATNL KAEPLDAPDA 120 GVSGGQGETA VFHESFHMNQ ELQQHEIPSA NDYKTSFAPS SGEDVITQMD YQQFNLQQLQ 180 PNHYIGLDDG GQAAVNLFSH FSDLLPTICP PPSAFLRAKC ALWDCPRPTQ GSEWCPDYCS 240 SFHATLAFNE GLPGMNPVLR PGGIDLKDGP LFAALSAKTQ GKEVGIPECE GAATTKSPWN 300 APELFDLSVL EGESLREWLF FDKPRRAFES GNRRQRSLPD YSGRGWHESR KQVVKEYGGL 360 KRSYYMDPQP SNHYEWHLFE YEISNCDACA LYRLELKLVD HKKGGKAKSN IELLVDLQQQ 420 MDKLTAEHSS DKKRHLKGRA KDNDEVAEFT ASDVGIIKEN SLSAYHEEMV STQENPIYGP 480 HLPYGYTIES LNNYYDSDLN YLGDGA

Sequence ? help Back to Top

Protein Sequence Length: 506 aa Download sequence

MSKGCRSASH ALFKDKAKNR VDDLQCMFSD LLSARRENRT GDVAVLEEQV NQMLREWKAE  60
LNEASPATSA LVGNSRVSSD LSSEIRRLLQ LGEEDDDATS KLADHSATNL KAEPLDAPDA  120
GVSGGQGETA VFHESFHMNQ ELQQHEIPSA NDYKTSFAPS SGEDVITQMD YQQFNLQQLQ  180
PNHYIGLDDG GQAAVNLFSH FSDLLPTICP PPSAFLRAKC ALWDCPRPTQ GSEWCPDYCS  240
SFHATLAFNE GLPGMNPVLR PGGIDLKDGP LFAALSAKTQ GKEVGIPECE GAATTKSPWN  300
APELFDLSVL EGESLREWLF FDKPRRAFES GNRRQRSLPD YSGRGWHESR KQVVKEYGGL  360
KRSYYMDPQP SNHYEWHLFE YEISNCDACA LYRLELKLVD HKKGGKAKSN IELLVDLQQQ  420
MDKLTAEHSS DKKRHLKGRA KDNDEVAEFT ASDVGIIKEN SLSAYHEEMV STQENPIYGP  480
HLPYGYTIES LNNYYDSDLN YLGDGA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	VOZ family protein