PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA47553.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

ERF

Protein Properties

Length: 418aa MW: 46280.7 Da PI: 9.8621

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA47553.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14	0.00015	58	80	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C ksF + + L+ H+r H PKA47553.1 58 HCCSLCAKSFASAMALNGHMRIH 80 5699*****************99 PP
2	AP2	48.2	2.7e-15	258	309	1	56
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 + y+GVr ++ g+Wv+e+r+p++ + ++lg+f t+e+Aa+a++ a+ +l+ge PKA47553.1 258 PVYRGVR-ERNGGKWVCEVREPRK---KNGIWLGTFRTPEMAARAHDVAAIALRGE 309 68**9.7779**999855...478**********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MEIARGSSCD RERRAPVLFL KLSNGVVVSS RCAYRESING ISNSDGYVDV NGGSRRHHCC 60 SLCAKSFASA MALNGHMRIH KDHRRPMYDD VDHHDQLPRF GSPEAAEALL LLSNSSPEGA 120 GEKKKVGMCS LLAAVDHLEL KEKKKKKKKK YVCDICGQRF ETGRALGGHK SGHFREAKLR 180 RMSTDADEPL KWGRRRRRSG STCARSATRV LQLAGLSSSA SSSGDLQYLS PSSFRRPPVV 240 PSPKRKAGRR KFRETRHPVY RGVRERNGGK WVCEVREPRK KNGIWLGTFR TPEMAARAHD 300 VAAIALRGES AALNFPDSAW SLPQASYSSP DEIRRAAVRA AEMYQQISAT VESEEVTSRP 360 LAHAEAGSAV FEDEEEVFNM PGLVIEMAAG MLMSPPAMAA GIDWEGQECI ADMRLWIE

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MEIARGSSCD RERRAPVLFL KLSNGVVVSS RCAYRESING ISNSDGYVDV NGGSRRHHCC  60
SLCAKSFASA MALNGHMRIH KDHRRPMYDD VDHHDQLPRF GSPEAAEALL LLSNSSPEGA  120
GEKKKVGMCS LLAAVDHLEL KEKKKKKKKK YVCDICGQRF ETGRALGGHK SGHFREAKLR  180
RMSTDADEPL KWGRRRRRSG STCARSATRV LQLAGLSSSA SSSGDLQYLS PSSFRRPPVV  240
PSPKRKAGRR KFRETRHPVY RGVRERNGGK WVCEVREPRK KNGIWLGTFR TPEMAARAHD  300
VAAIALRGES AALNFPDSAW SLPQASYSSP DEIRRAAVRA AEMYQQISAT VESEEVTSRP  360
LAHAEAGSAV FEDEEEVFNM PGLVIEMAAG MLMSPPAMAA GIDWEGQECI ADMRLWIE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	143	149	KKKKKKK
2	144	150	KKKKKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51990.1	5e-51	ERF family protein