PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA47227.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | MYB | ||||||||
Protein Properties | Length: 197aa MW: 22786.6 Da PI: 6.8026 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.6 | 2.4e-17 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd++l+++++ +G g W+ ar g++Rt+k+c++rw++yl PKA47227.1 15 KGPWTMEEDLILINYIANHGEGVWNNLARSAGLKRTGKSCRLRWLNYL 62 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.2 | 1.4e-16 | 68 | 111 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE++l+ +++ ++G++ W++Ia+ ++ gRt++++k++w++ PKA47227.1 68 RGNITPEEQLLIMELHSRWGNR-WSKIAKQLP-GRTDNEIKNYWRT 111 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence |
MDKRISSSEE ADVRKGPWTM EEDLILINYI ANHGEGVWNN LARSAGLKRT GKSCRLRWLN 60 YLRPDVRRGN ITPEEQLLIM ELHSRWGNRW SKIAKQLPGR TDNEIKNYWR TRIQKKVKNE 120 EPMLDFSNPM ITNHEVGSSH TSIMDQEAAT MTHESSYYSN LYHGGTNPTA YAPEFIAGDP 180 GEIIWSVDDF WSMQSLN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27810.1 | 5e-79 | MYB family protein |