PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA46501.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

DBB

Protein Properties

Length: 279aa MW: 29721.5 Da PI: 4.9976

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA46501.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	16.4	1.9e-05	4	45	5	40
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40 C+ ++ + ++l C ++ lC C H+ H++ PKA46501.1 4 LCDVCGVEGATLLCCADEAALCGACDGRVHSAnkfagkHRRL 45 7***999***************9999657778888765 PP
2	zf-B_box	25	3.9e-08	66	102	3	37
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg..H 37 + C+ ++e++ fC++++ lC+dC + +H H PKA46501.1 66 LPLCDICKEQRGFVFCQEDRAILCRDCDVPIHTAniH 102 579****************************944563 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
MKVLCDVCGV EGATLLCCAD EAALCGACDG RVHSANKFAG KHRRLSLLHP SASSSSSSSS 60 RHSRPLPLCD ICKEQRGFVF CQEDRAILCR DCDVPIHTAN IHASRHSRFL LTGILLSDTP 120 VSSPSSSSCP QRPPEETAAF SGGGSSITDY LTKMLPGWRV EDFLFDDDGA AAAEAGRGGD 180 CFACEALPAV EGELGDLLSG YWIAPDGDNL PIWLPPSSGV INTDAVTVAA APHEPPPALP 240 VQNLMEESRH GWTGASVFVV PQLEYERRCT RVEGIRTSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	6e-34	DBB family protein