PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA46455.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | SBP | ||||||||
Protein Properties | Length: 207aa MW: 21788.8 Da PI: 8.0834 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 72.4 | 7.9e-23 | 131 | 183 | 1 | 53 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETT CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhels 53 +Cq+egC +dl++ak+yhrrhkvCe+hska+ v+++gl+qrfCqqC ++ ls PKA46455.1 131 RCQAEGCGVDLTHAKHYHRRHKVCEFHSKASIVIAAGLSQRFCQQCNFMYFLS 183 6*********************************************9777776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 207 aa Download sequence |
MMLEYEWANP AAAAAAAAMM LFGEGGVDGG QEIPGVFEHF DGHGLAVAGE FFEPPAQHLN 60 AAALFSTVPA APVNAAACGQ RYGLGLPPPH APAAPARIGL NLGVRTYFSS ASPEEEMGRG 120 RVCRRRTRTA RCQAEGCGVD LTHAKHYHRR HKVCEFHSKA SIVIAAGLSQ RFCQQCNFMY 180 FLSSIKGSVA AGSASPTTIA GEGSLKT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G02065.1 | 5e-29 | SBP family protein |