PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA46215.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | ERF | ||||||||
Protein Properties | Length: 206aa MW: 22049.7 Da PI: 5.1315 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.1 | 7.8e-17 | 40 | 91 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + +kGVr++ rWv+e+r+p +k+ r+++g+f t+e+Aa+a++ a+ +l+g PKA46215.1 40 PVFKGVRRRGAADRWVCELREP---NKKSRIWVGTFPTPEMAARAHDVAAMALRG 91 579******************8...347*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence |
MTGFIDSREQ EPAPVEYATV SSAPPKRRAG RTKFRETRHP VFKGVRRRGA ADRWVCELRE 60 PNKKSRIWVG TFPTPEMAAR AHDVAAMALR GRAACLNFAD SASLLPIVPA SAGEIRRAAA 120 AAAEAFGPGG THFAAGAEPA SAAPVREEKV DFAGDGTEVD LGVLYDDDQV MFGSPEIWPE 180 VAGVDLAGWE DGDSAGDYVL LWSHSV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51990.1 | 1e-34 | ERF family protein |