PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027368978.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GATA
Protein Properties Length: 304aa    MW: 33668.9 Da    PI: 10.1654
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027368978.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.51.9e-18169202134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     Cs C+t++TplWR+gp g+k+LCnaCG+++rk +
  XP_027368978.1 169 CSDCNTSSTPLWRSGPKGPKSLCNACGIRQRKAR 202
                     *******************************987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MTPVSLNPPP GPSIQGHTQL FISPNNQDCL TLFNILDPRQ AFEFRENYPQ DDKMVLNHDG  60
SSSNNQLCNS SFISPAPVMD DPSSACDRDI SLHKMDGEDG KNGHGSVKWM SSKMRLMKKM  120
MRPSTSPVTD KAIKSTTISP SSRFQNQGYE NRYSQRSPRN NGSSITRVCS DCNTSSTPLW  180
RSGPKGPKSL CNACGIRQRK ARRAMAEAAN GLATPTNNAA STKTRVHNKE KKSRTNHFAQ  240
LKNKHKSSTT TSSASSEGVR KFEYFKDFTI SLRNNTAFPQ VFPRDEVAEA ALLLMDLSCG  300
FVHL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.19e-24GATA family protein