PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027368978.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | GATA | ||||||||
Protein Properties | Length: 304aa MW: 33668.9 Da PI: 10.1654 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 57.5 | 1.9e-18 | 169 | 202 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 Cs C+t++TplWR+gp g+k+LCnaCG+++rk + XP_027368978.1 169 CSDCNTSSTPLWRSGPKGPKSLCNACGIRQRKAR 202 *******************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 304 aa Download sequence |
MTPVSLNPPP GPSIQGHTQL FISPNNQDCL TLFNILDPRQ AFEFRENYPQ DDKMVLNHDG 60 SSSNNQLCNS SFISPAPVMD DPSSACDRDI SLHKMDGEDG KNGHGSVKWM SSKMRLMKKM 120 MRPSTSPVTD KAIKSTTISP SSRFQNQGYE NRYSQRSPRN NGSSITRVCS DCNTSSTPLW 180 RSGPKGPKSL CNACGIRQRK ARRAMAEAAN GLATPTNNAA STKTRVHNKE KKSRTNHFAQ 240 LKNKHKSSTT TSSASSEGVR KFEYFKDFTI SLRNNTAFPQ VFPRDEVAEA ALLLMDLSCG 300 FVHL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G26150.1 | 9e-24 | GATA family protein |