PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027368884.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | FAR1 | ||||||||
Protein Properties | Length: 628aa MW: 72807.1 Da PI: 7.206 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 68.1 | 2.2e-21 | 68 | 159 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y ++A++ GFs+rk++s+ s + g i+kr+fvC+++g++ +kk + +++r r++ r+gC+ak+ ++ke ++w v ++++ HnHel XP_027368884.1 68 EYYGNFARKNGFSIRKERSRISPQLG-IYKRDFVCYRSGFAPVKKKPNGEHHRDRKSVRCGCDAKMYLSKEVvegVSQWFVVQFSNVHNHELL 159 59********************8888.********************9**********************99877789*************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 628 aa Download sequence |
MTSIPSKNLW IRRQQCPCGD WKCYITYEGD AEEGSTPPEL VKAEKASSAA MITPYVGMVF 60 KSDDDAFEYY GNFARKNGFS IRKERSRISP QLGIYKRDFV CYRSGFAPVK KKPNGEHHRD 120 RKSVRCGCDA KMYLSKEVVE GVSQWFVVQF SNVHNHELLE DDQVRLLPAY RKIHEADQER 180 ILLLSKAGFP IHRIVKMLEL EKGIQGGQLP FLERDVRNFV QNRKKVVQEN EALLSEKREN 240 DILELLEACK DSYGRTIFFG CVLLQDETPQ SFSWALQTFV RFMRGRCPQT ILTDLEPGLR 300 DAIRSEFPGT KHVIPQWNIL YKLPSWFSLR LGSRYAEFKS EFDALFHIES TEDFELQWSQ 360 MISVFELGSD KHTDLLFSVR ASWAQSYVRG YFLAQMVTIA YSKSIDAFLK GIFTTHTCLR 420 SFFEQVGISA SFQRQAHQET QYIHLKTCIP IEEHARSILT PFAFNALQQE LLLAMQYATS 480 EMANGSYIVR HFKRMDGGRL VIWLAEDEQI HCSCKEFESS GILCRHALRV FVIKNYFQLP 540 DKYFLSRWRR ECSLLIDDDH NNQGIGGDWF QEYQSLAETL FSESSITKER SDYARKELTK 600 ELTRILNEVR NMPETDAVCM TMTVSPAS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28530.1 | 0.0 | FAR1 family protein |