PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027368703.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 358aa MW: 40393.9 Da PI: 4.9517

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027368703.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53	7.8e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +grWTteEd++l +++++ G g+W++ ++ g+ R++k+c++rw +yl XP_027368703.1 14 KGRWTTEEDKILTEYIQENGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	54	3.7e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T++E+e++v++++ lG++ W+ Ia +++ gRt++++k++w+++l XP_027368703.1 67 RGNITPQEEEIIVKLHAVLGNR-WSVIAGHLP-GRTDNEIKNYWNSHL 112 7999****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MGRAPCCEKV GLKKGRWTTE EDKILTEYIQ ENGEGSWRSL PKNAGLLRCG KSCRLRWINY 60 LRSDVKRGNI TPQEEEIIVK LHAVLGNRWS VIAGHLPGRT DNEIKNYWNS HLRRKIYCFM 120 KSLNESLPPI DMAAVNVAAT SKRRTSRSIK TQQATQDDKN MPFIQNSSQE NTREVPKLQP 180 SMHKRNVTSQ TLNDDDDIKG YTNLDAYCEI VDNTNGSITA SCPSMELGVE ALGPYQWLDD 240 EIMKLSYMFE NGVLVNQGGI VSNEEGFSRN NCGLIGEDIM SGNYEESKGG VWSSSNAESG 300 EWNNSCSSVN SVYDYHQWPD MHLEGSVQSY SPWDLCEEDQ NVTSFWGTSN CEGSGFYQ

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MGRAPCCEKV GLKKGRWTTE EDKILTEYIQ ENGEGSWRSL PKNAGLLRCG KSCRLRWINY  60
LRSDVKRGNI TPQEEEIIVK LHAVLGNRWS VIAGHLPGRT DNEIKNYWNS HLRRKIYCFM  120
KSLNESLPPI DMAAVNVAAT SKRRTSRSIK TQQATQDDKN MPFIQNSSQE NTREVPKLQP  180
SMHKRNVTSQ TLNDDDDIKG YTNLDAYCEI VDNTNGSITA SCPSMELGVE ALGPYQWLDD  240
EIMKLSYMFE NGVLVNQGGI VSNEEGFSRN NCGLIGEDIM SGNYEESKGG VWSSSNAESG  300
EWNNSCSSVN SVYDYHQWPD MHLEGSVQSY SPWDLCEEDQ NVTSFWGTSN CEGSGFYQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47460.1	3e-74	MYB family protein