PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027368515.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MYB | ||||||||
Protein Properties | Length: 247aa MW: 27714.7 Da PI: 6.4054 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.5 | 5.4e-17 | 19 | 64 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W+ +Ed l+++v q+G+++W+ I++ ++ gR++k+c++rw + XP_027368515.1 19 KGSWSSQEDATLLKLVDQHGPRNWSIISSGIP-GRSGKSCRLRWCNQ 64 799*****************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 56.5 | 6.3e-18 | 73 | 115 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+ Ed++++da++ +G++ W+tI+r ++ gRt++ +k++w++ XP_027368515.1 73 PFTPSEDKIIIDAHAVHGNK-WATISRLLP-GRTDNAIKNHWNST 115 89******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MDANSNCNGG GSDGSDRVKG SWSSQEDATL LKLVDQHGPR NWSIISSGIP GRSGKSCRLR 60 WCNQLSPEVQ HRPFTPSEDK IIIDAHAVHG NKWATISRLL PGRTDNAIKN HWNSTLRRRR 120 MAEQSPTSVS SASSPGKRPS SLEPNYPLKK PCVDEVSMET EDERTEEFSQ LASPVTTSLS 180 LLPPGEKTEK DEEEFEENTK TDDQTYFMET LRRMIADEVR NHVESLRRDR ESFSHGTGLD 240 LNPKLPK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50060.1 | 2e-43 | MYB family protein |