PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027368360.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GRAS
Protein Properties Length: 448aa    MW: 49502.2 Da    PI: 6.227
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027368360.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS316.46.1e-97704441373
            GRAS   1 lvelLlecAeavssgdle..laqalLarlselasp.....dgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevs 88 
                     lv+lL+++Aea+++g ++  la+a+L rl++l++p     +g++m+Rlaayft AL+  l +     + a ++ +    + +++l+a++l++++s
  XP_027368360.1  70 LVHLLMAAAEALTTGTQShhLARAILVRLNDLVTPnsgtnSGTNMERLAAYFTLALHCLLDG----AAGAHSVDH---LHLTDTLTAFQLLQDMS 157
                     68***********9655444************665111114569*****************9....222233333...4599************* PP

            GRAS  89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp..slRiTgvgspesg.....skeeleetgerLakfAeelgvpf 176
                     P+++f+h+t NqaIleav++e+rvHiiD+d+++G+QW++L+qaL+s+++gpp  +lRiT++++   +     s  +++ tg+rL+ fA+++g pf
  XP_027368360.1 158 PYVNFAHFTSNQAILEAVAHERRVHIIDYDVMEGAQWASLIQALSSKKDGPPgpHLRITALSRTGVNgrkvsSIGTVQDTGRRLTAFAASVGQPF 252
                     ************************************************887667********96555888888999******************* PP

            GRAS 177 efnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.nsesFlerflealeyysalfds 270
                     +f++   +  e+++ ++L++ +gE+l+ n++++l +l  + +++     ++Lk  k+l P+vv++ve+e++  +++ F+  f+++l++ysa+fds
  XP_027368360.1 253 SFHTCRLDPDEKFRASSLKLVRGEVLVFNCMMHLPHLSYRAGDSVA---SFLKGAKELCPRVVTLVEEEVEPvGDTGFVGLFMDSLHHYSAVFDS 344
                     ****9999*****************************988777777...9*********************99********************** PP

            GRAS 271 leaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve.eesgslvlgWkd 364
                     le+++p +  + + vEr++lg++i+  v    ++    +e+ ++W e+l+++GF+ vp+s  + +qa+lll  ++ dgyrve  +++ lvlgWk+
  XP_027368360.1 345 LEVGFPMQRWAGALVERVFLGPRIRGSVGRMYRS---GEEERGSWVEWLGAVGFRGVPISFANHCQANLLLGLFN-DGYRVEkMRNNKLVLGWKS 435
                     ****************************999988...677789********************************.******456999******* PP

            GRAS 365 rpLvsvSaW 373
                     r+L+s+S+W
  XP_027368360.1 436 RRLLSASVW 444
                     ********* PP
Sequence ? help Back to Top
Protein Sequence    Length: 448 aa     Download sequence    
MDDPHLLDFS DYSITTTPFS DDEWNLFSPL VDWDSFTTLM DDTVVSTPDQ LTLDQESSVV  60
VCDDQKGLRL VHLLMAAAEA LTTGTQSHHL ARAILVRLND LVTPNSGTNS GTNMERLAAY  120
FTLALHCLLD GAAGAHSVDH LHLTDTLTAF QLLQDMSPYV NFAHFTSNQA ILEAVAHERR  180
VHIIDYDVME GAQWASLIQA LSSKKDGPPG PHLRITALSR TGVNGRKVSS IGTVQDTGRR  240
LTAFAASVGQ PFSFHTCRLD PDEKFRASSL KLVRGEVLVF NCMMHLPHLS YRAGDSVASF  300
LKGAKELCPR VVTLVEEEVE PVGDTGFVGL FMDSLHHYSA VFDSLEVGFP MQRWAGALVE  360
RVFLGPRIRG SVGRMYRSGE EERGSWVEWL GAVGFRGVPI SFANHCQANL LLGLFNDGYR  420
VEKMRNNKLV LGWKSRRLLS ASVWISPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.11e-134GRAS family protein