PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027368137.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 354aa MW: 39638.2 Da PI: 8.3671

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027368137.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53	7.9e-17	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+ +++++G+g +W + ++++g++R++k+c++rw++yl XP_027368137.1 14 KGPWSPEEDAKLKSYIEKHGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	38.2	3.4e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ XP_027368137.1 69 GGFSEEEDNIICSLYVSIGSR-WSVIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAKLKSYIE KHGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNLKHGG FSEEEDNIIC SLYVSIGSRW SVIAAQLPGR TDNDIKNYWN TRLKKKLLGK 120 HRREPRNRGN NYNSIKQQSI VNRGSDGDSS LSLVQENNTT STTTTQQPYW PQNMPVLPLP 180 VPLPNTNQGP CFNDQDSIKK LLIKLGGRFY GDYYHPTVDG MNLQFSNGEQ IGDQIYQEQV 240 HLGASSSSAC ITRATVNNNE FQFAQSDQYL GQGQGSFTSG IEEINGFEFL YGEGMIDHKI 300 IGSTTTVTTC SQNNTNWGET STPIYHHPLA SDYQSRQGLR QESALQEFSY PGAQ

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MGRAPCCDKA NVKKGPWSPE EDAKLKSYIE KHGTGGNWIA LPQKIGLKRC GKSCRLRWLN  60
YLRPNLKHGG FSEEEDNIIC SLYVSIGSRW SVIAAQLPGR TDNDIKNYWN TRLKKKLLGK  120
HRREPRNRGN NYNSIKQQSI VNRGSDGDSS LSLVQENNTT STTTTQQPYW PQNMPVLPLP  180
VPLPNTNQGP CFNDQDSIKK LLIKLGGRFY GDYYHPTVDG MNLQFSNGEQ IGDQIYQEQV  240
HLGASSSSAC ITRATVNNNE FQFAQSDQYL GQGQGSFTSG IEEINGFEFL YGEGMIDHKI  300
IGSTTTVTTC SQNNTNWGET STPIYHHPLA SDYQSRQGLR QESALQEFSY PGAQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	6e-79	MYB family protein