PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027368080.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 636aa MW: 73184.3 Da PI: 8.3188

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027368080.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23	1.8e-07	458	499	2	40
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqc 40 ++W +eE +ll ++ +++++g +W+ I++++g+gR+ +++ XP_027368080.1 458 KPWNKEEIDLLRKGMQKYPKGtsrRWEVISEYIGTGRSVEEI 499 69************************************9987 PP
2	Myb_DNA-binding	27.7	6.4e-09	579	623	3	45
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 W++ + lv+a k ++++ +W+++a+ ++ g+t +qck ++ XP_027368080.1 579 VWSAVQERALVQALKAFPKEtsqRWERVAAAVP-GKTVNQCKKKFA 623 6******************************.******9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 636 aa Download sequence
MAVHTKFHLI AYSEELVDGQ PIFVSSNCLP IKASNFEPAG HAFHSVALKL LGVQEDSRDA 60 DSKKVVDDKE QAYFPSDSYS SKGKKKSGAG DKQQDHYALL GLSHLRYLAT EDQIRKSYRE 120 TALRFHPDKQ AALLLAEESE AAKQEKKDEI ESHFKAIQEA YEVLIDPLKR RIYDSTDEFD 180 DEIPTDCAPQ DFFKVFGPAF MRNGRWSVNQ PIPTLGDDNT PLKEVDNFYN FWYSFKSWRE 240 FPHTDEFDLE QAESRDHKRW MERQNAKLSE KARKEEYARI RTLVDNAYKR DPRILRRKEE 300 EKAEKQRKKE AKIMAKRLQE EEAARIAEEE RRRKEEEERQ AAEAALQHKR VKEKEKKLLR 360 KERTRLRTLS GPILSQHLFD ISNDDVEKLC MTLDIEQLRS LCENMEGRQV LLEQAKVLRD 420 ALSCKKEVVD EKSDQQNVNG SIKANGSTSL TNTEKKEKPW NKEEIDLLRK GMQKYPKGTS 480 RRWEVISEYI GTGRSVEEIM KATKTVLLQK PDSSKAFDAF LEKRKPGAQS IASPLTTREE 540 LEGTSSTTNN VEDSDSKSAE NQNNTTSANG VSSNSEQDVW SAVQERALVQ ALKAFPKETS 600 QRWERVAAAV PGKTVNQCKK KFAMMKENFR NKKTAV

Sequence ? help Back to Top

Protein Sequence Length: 636 aa Download sequence

MAVHTKFHLI AYSEELVDGQ PIFVSSNCLP IKASNFEPAG HAFHSVALKL LGVQEDSRDA  60
DSKKVVDDKE QAYFPSDSYS SKGKKKSGAG DKQQDHYALL GLSHLRYLAT EDQIRKSYRE  120
TALRFHPDKQ AALLLAEESE AAKQEKKDEI ESHFKAIQEA YEVLIDPLKR RIYDSTDEFD  180
DEIPTDCAPQ DFFKVFGPAF MRNGRWSVNQ PIPTLGDDNT PLKEVDNFYN FWYSFKSWRE  240
FPHTDEFDLE QAESRDHKRW MERQNAKLSE KARKEEYARI RTLVDNAYKR DPRILRRKEE  300
EKAEKQRKKE AKIMAKRLQE EEAARIAEEE RRRKEEEERQ AAEAALQHKR VKEKEKKLLR  360
KERTRLRTLS GPILSQHLFD ISNDDVEKLC MTLDIEQLRS LCENMEGRQV LLEQAKVLRD  420
ALSCKKEVVD EKSDQQNVNG SIKANGSTSL TNTEKKEKPW NKEEIDLLRK GMQKYPKGTS  480
RRWEVISEYI GTGRSVEEIM KATKTVLLQK PDSSKAFDAF LEKRKPGAQS IASPLTTREE  540
LEGTSSTTNN VEDSDSKSAE NQNNTTSANG VSSNSEQDVW SAVQERALVQ ALKAFPKETS  600
QRWERVAAAV PGKTVNQCKK KFAMMKENFR NKKTAV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11450.1	0.0	MYB family protein