PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027367900.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GRAS
Protein Properties Length: 464aa    MW: 53214.4 Da    PI: 6.2745
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027367900.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS301.22.6e-92834621374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lLl+ A+av++++l    + L+ l +++s +gd++qR++ayf+ +Laarl+   s  y+ l  ++t+    +ee+ a++ ++ vsP+++f+h
  XP_027367900.1  83 LIHLLLSTATAVDENNLDSSLENLTDLYQTVSLTGDSVQRVVAYFVDGLAARLLTRKSPFYDMLMEEPTT----EEEFLAFTDLYRVSPYYQFAH 173
                     689****************************************************9*****999988887....677888899************ PP

            GRAS  96 ltaNqaIleavege.....ervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeel.gvpfefnvlv 182
                     +taNqaIlea+e+e     +++H+iDfd+s+G+QWp+L+q+L++++  ++  slRiTg+g+    + +el+et++rL +f + + ++ fef+ l 
  XP_027367900.1 174 FTANQAILEAFEKEeernnKALHVIDFDVSYGFQWPSLIQSLSEKAtsGNRISLRITGFGK----NLKELQETESRLVSFSKGFgNLVFEFQGL- 263
                     ************9988888889**********************99755566*********....99***************99459******8. PP

            GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                        l   ++ +Lr k++E++aVnlv  l +l     +  + ++++L +v sl+P +vv+veqe +++  sFl rf+++l+y++a+fdsl+  lp 
  XP_027367900.1 264 ---LRGSRVVNLRKKKNETVAVNLVSYLNTLS----CFMK-ISDTLGFVHSLNPSIVVLVEQEGSRSPRSFLSRFTDSLHYFAAMFDSLDDCLPL 350
                     ...7777889****************999997....3333.578*************************************************** PP

            GRAS 278 eseerikvErellgreivnvvacegae..rrerhetlekWrerleeaGFkpvplsekaakqaklllrkv........ksdg...yrveee.sgsl 358
                     es er  +E++llg+ei++++     +     + e++e+W++r+e+  F + ++s+k + qaklll++         +++g   +rv e+ +g +
  XP_027367900.1 351 ESTERLRIEKKLLGKEIKSMLNYDDVDgeDCPKYERMETWKARMENHRFVATKISSKSMIQAKLLLKMRthycplqfEEEGgggFRVSERdEGRA 445
                     *********************98876622467899*******************************98522222211222233488876645555 PP

            GRAS 359 v.lgWkdrpLvsvSaWr 374
                     + lgW++r L++vSaW+
  XP_027367900.1 446 IsLGWQNRFLLTVSAWQ 462
                     57**************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 464 aa     Download sequence    
MEDSEEDGFL NLSLSVAADR ERERKKKGKI IREHNVSMSS TTTRNSYEGY EGKIFRLLQM  60
REQMLRQDHR RKGVVEDGNG LPLIHLLLST ATAVDENNLD SSLENLTDLY QTVSLTGDSV  120
QRVVAYFVDG LAARLLTRKS PFYDMLMEEP TTEEEFLAFT DLYRVSPYYQ FAHFTANQAI  180
LEAFEKEEER NNKALHVIDF DVSYGFQWPS LIQSLSEKAT SGNRISLRIT GFGKNLKELQ  240
ETESRLVSFS KGFGNLVFEF QGLLRGSRVV NLRKKKNETV AVNLVSYLNT LSCFMKISDT  300
LGFVHSLNPS IVVLVEQEGS RSPRSFLSRF TDSLHYFAAM FDSLDDCLPL ESTERLRIEK  360
KLLGKEIKSM LNYDDVDGED CPKYERMETW KARMENHRFV ATKISSKSMI QAKLLLKMRT  420
HYCPLQFEEE GGGGFRVSER DEGRAISLGW QNRFLLTVSA WQSV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.14e-54GRAS family protein