PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027367890.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MYB | ||||||||
Protein Properties | Length: 301aa MW: 34227.2 Da PI: 7.2833 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.8 | 2.5e-18 | 57 | 104 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT +Ed +lv++++ +G g+W+++ar g++R++k+c++rw++yl XP_027367890.1 57 KGPWTVDEDTILVNYITTHGEGHWNSVARSAGLRRSGKSCRLRWLNYL 104 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 49.1 | 1.3e-15 | 110 | 153 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T +E+ l++d++ ++G++ W++Ia++++ gRt++++k++w++ XP_027367890.1 110 RGNITLQEQILILDLHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 153 7899******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 301 aa Download sequence |
MIALMGKLGD EGVRNNNVLR SRKYEEKVHH MDFFIYMINN TPEEKEKEKE IDIGIRKGPW 60 TVDEDTILVN YITTHGEGHW NSVARSAGLR RSGKSCRLRW LNYLRPDVRR GNITLQEQIL 120 ILDLHSRWGN RWSKIAQHLP GRTDNEIKNY WRTRVIKQAK QLKCDVNSTQ FRDALRYVWM 180 PRLLERVQPT PHTLQGPSPN PYGAGVQNGS DSGTECAKAN HFSCAGGAYS DSSSGELQVP 240 SNSDHSDSSG LEKGSGPWAG LSNQIFEQGN GESLESLWND ESIWFLQQLS DEVDIKYNSL 300 P |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G48000.1 | 3e-78 | MYB family protein |