PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027367628.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GRAS
Protein Properties Length: 461aa    MW: 52828.4 Da    PI: 6.8022
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027367628.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS303.84.1e-93794591374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lLl+ A+av++++ ++a + L  l +++s +gd++qR++ayf+ +Laarl+   s  y+ l  ++ts    +ee+ a++ ++ vsP+++f+h
  XP_027367628.1  79 LIHLLLTTATAVDERNITAALENLIDLYQTVSLTGDSVQRVVAYFADGLAARLLTRKSPFYDMLMEEPTS----EEEFLAFTDLYRVSPYYQFAH 169
                     689****************************************************99****999888885....788889999************ PP

            GRAS  96 ltaNqaIleavege.....ervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeel..gvpfefnvl 181
                     +taNqaIlea+e+e     +++H+iDfd+s+G+QWp+L+q+L++++  ++  slRiTg+g+    + +el+et+ rL +f + +  ++ fef+ l
  XP_027367628.1 170 FTANQAILEAFEEEearnnKALHVIDFDVSYGFQWPCLIQSLSEKAtnGNRISLRITGFGN----NLKELQETEARLVSFSKGFsnHLVFEFQGL 260
                     ************9988888899**********************99745556*********....99*************996522788999997 PP

            GRAS 182 vakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276
                     +     +l++ +Lr +++E++aVnlv  l +   + +++    +++L +v sl+P +vv+v qe +++ ++Fl rf+e+l+y++a+fdsl+  lp
  XP_027367628.1 261 LK---GSLRIINLRKRKNETVAVNLVSYLNTWR-SFMKI----SDTLGFVHSLNPSIVVLVKQEGSRSVKTFLSRFTESLHYFAAMFDSLDDCLP 347
                     44...4566669999************999986.44444....46************************************************** PP

            GRAS 277 reseerikvErellgreivnvvacegae.rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.s.......dg...yrveee.sgsl 358
                      es er  +E++llg+ei++++ +  +     + e++e+W++r+e+ GF   ++s+k + qaklll++           +g   +rv e+ +gs+
  XP_027367628.1 348 LESIERLRIEKKLLGKEIKSMLNHDMDGvDCPKYERMETWKDRMENQGFVGRKISSKCVIQAKLLLKMRThYyplqfeeEGgggFRVSERdEGSV 442
                     **********************998887557899********************************98651111111111123366665546777 PP

            GRAS 359 v.lgWkdrpLvsvSaWr 374
                     + lgW++r L++vSaW+
  XP_027367628.1 443 IsLGWQNRFLLTVSAWQ 459
                     79**************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 461 aa     Download sequence    
MEDSEGEELL NLTLSVAAGR ERKKKGKIRD INANSIIFPM SSYEGFEGKI FRLLQTREQM  60
LRQEHRRKGV VEDGNGLPLI HLLLTTATAV DERNITAALE NLIDLYQTVS LTGDSVQRVV  120
AYFADGLAAR LLTRKSPFYD MLMEEPTSEE EFLAFTDLYR VSPYYQFAHF TANQAILEAF  180
EEEEARNNKA LHVIDFDVSY GFQWPCLIQS LSEKATNGNR ISLRITGFGN NLKELQETEA  240
RLVSFSKGFS NHLVFEFQGL LKGSLRIINL RKRKNETVAV NLVSYLNTWR SFMKISDTLG  300
FVHSLNPSIV VLVKQEGSRS VKTFLSRFTE SLHYFAAMFD SLDDCLPLES IERLRIEKKL  360
LGKEIKSMLN HDMDGVDCPK YERMETWKDR MENQGFVGRK ISSKCVIQAK LLLKMRTHYY  420
PLQFEEEGGG GFRVSERDEG SVISLGWQNR FLLTVSAWQL V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.14e-58GRAS family protein