PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027366191.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

Trihelix

Protein Properties

Length: 449aa MW: 51198.8 Da PI: 6.552

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027366191.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	84.2	1.7e-26	121	217	1	85
trihelix 1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfd 83 +Wt+++v++Li+a+++++e++ ++ +kk++W++vsk+m+erg+++sp+qC++k+++lnkrykk++++ +++ +++++++ ++d XP_027366191.1 121 KWTDKMVKLLITAVSYIGEDVTADGggsgrrkfavlQKKGKWKSVSKVMAERGYHVSPQQCEDKFNDLNKRYKKLNDMIGRGtSCQVVENPTLLD 215 7******************986556677888899*******************************************95688888887776 PP trihelix 84 ql 85 + XP_027366191.1 216 VI 217 55 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MEGNLSQGGI IQGGSSFGGF DLPGSIRVQH QAQHPHTMHQ HQTHPRQGSS AVHSAVHDGF 60 PLTVGTLQNC DQTISMTDFS KGDRSKNSAS EEDEPSFTED GVDGHHEVSR GKKGSPWQRV 120 KWTDKMVKLL ITAVSYIGED VTADGGGSGR RKFAVLQKKG KWKSVSKVMA ERGYHVSPQQ 180 CEDKFNDLNK RYKKLNDMIG RGTSCQVVEN PTLLDVIDYL SEKEKDDVRK ILSSKHLFYE 240 EMCSYHNGNR LHLPPDPALQ RSLQLALRNR DDHDNDDIRR SHHDDHEEDD QDVEIDDHDD 300 FEENCTSHGD SRGIYGPLGG SMKKLKRGQG QEDANNFGNS LNCQDYSKSS YPHGQMVQSD 360 VSQVLPENSR AAWLQKQWIE SRSLQLEEQK LQIQVEMLEL EKQRFKWQRF SKKKDRELEK 420 LSLENERMKL ENERIALELK RKEMGTGFN

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MEGNLSQGGI IQGGSSFGGF DLPGSIRVQH QAQHPHTMHQ HQTHPRQGSS AVHSAVHDGF  60
PLTVGTLQNC DQTISMTDFS KGDRSKNSAS EEDEPSFTED GVDGHHEVSR GKKGSPWQRV  120
KWTDKMVKLL ITAVSYIGED VTADGGGSGR RKFAVLQKKG KWKSVSKVMA ERGYHVSPQQ  180
CEDKFNDLNK RYKKLNDMIG RGTSCQVVEN PTLLDVIDYL SEKEKDDVRK ILSSKHLFYE  240
EMCSYHNGNR LHLPPDPALQ RSLQLALRNR DDHDNDDIRR SHHDDHEEDD QDVEIDDHDD  300
FEENCTSHGD SRGIYGPLGG SMKKLKRGQG QEDANNFGNS LNCQDYSKSS YPHGQMVQSD  360
VSQVLPENSR AAWLQKQWIE SRSLQLEEQK LQIQVEMLEL EKQRFKWQRF SKKKDRELEK  420
LSLENERMKL ENERIALELK RKEMGTGFN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	1e-164	Trihelix family protein