PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027365987.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MYB | ||||||||
Protein Properties | Length: 376aa MW: 42440.9 Da PI: 4.4794 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.4 | 1.2e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +grWT+eEde+l+++++ G g+W++ ++ g+ R++k+c++rw +yl XP_027365987.1 14 KGRWTAEEDEILAKYIEANGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 52 | 1.6e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ ++eE+ +v++++ +G++ W++Ia++++ gRt++++k++w+++l XP_027365987.1 67 RGNISAEEEHTIVKLHASFGNR-WSLIASHLP-GRTDNEIKNYWNSHL 112 7899******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 376 aa Download sequence |
MGRAPCCEKV GLKKGRWTAE EDEILAKYIE ANGEGSWRSL PKNAGLLRCG KSCRLRWINY 60 LRADLKRGNI SAEEEHTIVK LHASFGNRWS LIASHLPGRT DNEIKNYWNS HLSRRIYSFP 120 NTQPDSGVML PTPKRKGGRT SRWAMKKNKS NPQKGTQRPK QSVTQQNIES EVPPPSTPSL 180 EREGLMEMED VGEEIREEVE VHGTYEKYLN GVKESGDDDV LGLCQLEGIN GVSGELSFSD 240 ILDSCVEEET CGVLTLSEER ECNDVVGVGV ENERHNDDDA CHNKMASSES SANLSCNGDI 300 GEWNSSSSVT LGLEDRWDWE SVIEFNNIES HIAYDWEQKE NLLTWLWEDD DWESDGKNLG 360 ETDPQIQNDV VAWFLS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49330.1 | 1e-73 | MYB family protein |