PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027364662.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 282aa MW: 32373.6 Da PI: 7.4996

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027364662.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.2	1.8e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd++l+++v+++G g W+ +++ g++R++k+c++rw++yl XP_027364662.1 14 RGAWSAEEDKILINYVQLHGEGKWRELSKRAGLKRCGKSCRLRWLNYL 61 89********************************************97 PP
2	Myb_DNA-binding	51.9	1.8e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + +E++l+++++++lG++ W++Ia +++ gRt++++k++w++yl XP_027364662.1 67 RGNISSDEEDLIIRLHNLLGNR-WSLIAGRLP-GRTDNEIKNYWNTYL 112 78999***************.*****.***********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence
MGRKGSCENQ DVNRGAWSAE EDKILINYVQ LHGEGKWREL SKRAGLKRCG KSCRLRWLNY 60 LKPDIKRGNI SSDEEDLIIR LHNLLGNRWS LIAGRLPGRT DNEIKNYWNT YLRKKVEQKH 120 NHNKVPNHSN NIPIKLRVES PGCSKNSLGI IDPTKSPHPM TIKPKSMRCT KVMMPTNAAN 180 DSVNPMMNLI TTSWNDQNPF GSTPPQDDHD HCLASFLNDF NINDLLMPYE DCHFNGYACV 240 EIPQHFGDQT CQVDDLIGNA WYENGRIDDY FVPEQDVSLF SF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35550.1	8e-59	MYB family protein