PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027364573.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

WRKY

Protein Properties

Length: 424aa MW: 46918.4 Da PI: 5.0478

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027364573.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	100.6	9.7e-32	204	260	2	58
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 Dgy+WrKYGqK++kg+++prsYY+Ct+agC+v+k+ver++++ k+v++tYeg+Hnh XP_027364573.1 204 ADGYRWRKYGQKVIKGNPNPRSYYKCTTAGCSVRKHVERDSRNLKYVTTTYEGRHNH 260 7******************************************************** PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MENKNKDNNN SEIMVSNSEG VFHGFSPQRK TKEEKGFDLN EPLMDTRLEA SPPRIDINMV 60 PDSEMGEFED QSACGMQMGE FEDQSEGHAR KDSEQVHSSN DAKRVKLNID LNAKMGDAEA 120 PICCSEETHS FDLEVNPDLP HTVSNNIGNE EEATQENLSP QEDAVDDGAE SGRRKRKRTE 180 ENTSRGIREP RVVVQIESEA TVLADGYRWR KYGQKVIKGN PNPRSYYKCT TAGCSVRKHV 240 ERDSRNLKYV TTTYEGRHNH GLPPPKNKNQ QVDNNDGGGV GGNALVTIAL PGNIGVSKPK 300 AQGQTGAPSF HTNPGFNNEF LRTGFESFNN DMNIGSSSTH QMSSSSLNNS NIIPYSSYGL 360 SLNPFATPHA ESIPSLFPER PMSSLLDVPS SSSSQPRLNF NGSNPGFPFR ATTDERDWYW 420 VPEA

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MENKNKDNNN SEIMVSNSEG VFHGFSPQRK TKEEKGFDLN EPLMDTRLEA SPPRIDINMV  60
PDSEMGEFED QSACGMQMGE FEDQSEGHAR KDSEQVHSSN DAKRVKLNID LNAKMGDAEA  120
PICCSEETHS FDLEVNPDLP HTVSNNIGNE EEATQENLSP QEDAVDDGAE SGRRKRKRTE  180
ENTSRGIREP RVVVQIESEA TVLADGYRWR KYGQKVIKGN PNPRSYYKCT TAGCSVRKHV  240
ERDSRNLKYV TTTYEGRHNH GLPPPKNKNQ QVDNNDGGGV GGNALVTIAL PGNIGVSKPK  300
AQGQTGAPSF HTNPGFNNEF LRTGFESFNN DMNIGSSSTH QMSSSSLNNS NIIPYSSYGL  360
SLNPFATPHA ESIPSLFPER PMSSLLDVPS SSSSQPRLNF NGSNPGFPFR ATTDERDWYW  420
VPEA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	173	178	RRKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.1	1e-36	WRKY family protein