PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027363901.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

HD-ZIP

Protein Properties

Length: 314aa MW: 35697.5 Da PI: 4.6337

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027363901.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59	7.8e-19	57	110	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ +q+++Le+ Fe ++++ +++ +LA++lgL+ rqV vWFqNrRa++k XP_027363901.1 57 KKRRLSVDQVKALEKNFEVENKLEPDRKVKLAQELGLQPRQVAVWFQNRRARWK 110 566899***********************************************9 PP
2	HD-ZIP_I/II	130.2	8.4e-42	56	148	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrls +qvk+LE++Fe e+kLep+rKv+la+eLglqprqvavWFqnrRAR+ktkqlE+dy +Lk++y+alk++ ++L++++e+L +e+ke XP_027363901.1 56 EKKRRLSVDQVKALEKNFEVENKLEPDRKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKANYEALKHNYDTLQQDNEALLKEIKE 148 69**************************************************************************************99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence
MKRLGSSDSL GALMTICPTA DEHSPRNNHV YGREFQSMLE GLDEEGCVEE SGHHTEKKRR 60 LSVDQVKALE KNFEVENKLE PDRKVKLAQE LGLQPRQVAV WFQNRRARWK TKQLERDYGV 120 LKANYEALKH NYDTLQQDNE ALLKEIKELK SRLQEENNES DASVKEEMIT LPESEYKMME 180 TAIPGSDSKE LNYECFNKSD EVGGASLFKD GSSDSDSSAI LNEENHSPNN AAISSCGVLQ 240 SHELLMSPGS SSLKFNCSSS SSPSSMNCFQ FQKQYPTQYV KMEEHNFLSA DEACNFFSDE 300 QPPTLQWYCS DEWS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	57	86	KKRRLSVDQVKALEKNFEVENKLEPDRKVK
2	105	113	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G40060.1	3e-85	HD-ZIP family protein