PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027363702.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 270aa MW: 30959.8 Da PI: 5.2327

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027363702.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.2	2.1e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ +++++G g+W++ +++ g+ R++k+c++rw +yl XP_027363702.1 14 KGPWTPEEDQILISYIQKHGHGNWRALPKHAGLLRCGKSCRLRWINYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	53	8.2e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ eE+e++++ +++lG++ W++Ia++++ gRt++++k+ w+++l XP_027363702.1 67 RGNFSSEEEEIIIKMHELLGNR-WSAIAAKLP-GRTDNEIKNVWHTHL 112 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 270 aa Download sequence
MVRAPCCEKM GLKKGPWTPE EDQILISYIQ KHGHGNWRAL PKHAGLLRCG KSCRLRWINY 60 LRPDIKRGNF SSEEEEIIIK MHELLGNRWS AIAAKLPGRT DNEIKNVWHT HLKKRSLNSD 120 SKRVSKPKII RSDSNFSTLT QSEYASLNFR EMDTTSSACT SSSDFSSASE GIKIMDNAIK 180 SEDIESMETM PQIDEIFWSE AAMDDACSTM PSNSWTVFSN ELIPLQYPFN SMEETFQQSY 240 GYNKSNFDDG MDFWYDLFIT SGESLEVPEF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23250.1	1e-79	MYB family protein