PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027363372.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MYB
Protein Properties Length: 273aa    MW: 31173.2 Da    PI: 8.9249
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027363372.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.67.6e-151562148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W++eEd +l + + ++G g+W++++ + g+ R +k+c++rw +yl
   XP_027363372.1 15 KGLWSPEEDNKLRNHILKHGHGCWSSVPIKAGLQRNGKSCRLRWINYL 62
                     678*******************************************97 PP
2Myb_DNA-binding54.92.1e-1768113148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+++++E+e ++ ++++lG++ W+ I+++++ gRt++++k++w++yl
   XP_027363372.1  68 RGKFSKQEEETILTLHHMLGNK-WSQISQHLP-GRTDNEIKNYWHSYL 113
                      89********************.*********.************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MGCQPLEKAK PKHRKGLWSP EEDNKLRNHI LKHGHGCWSS VPIKAGLQRN GKSCRLRWIN  60
YLRPGLKRGK FSKQEEETIL TLHHMLGNKW SQISQHLPGR TDNEIKNYWH SYLKKRVAKA  120
KEMESHNQIQ YASSSSDTKD SSPSLQKLAT QGPQNYNFTK EAHQSSLPKL LFAEWLSLDH  180
VHDVNTANSV DSMVLRNGFD QNSTFQDATM HDMSEGPFGE EYHKCLANIS TPEMFNSQLK  240
FATQMVENGF IHCIPGVDLS SNFSMSNDAI MYV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48920.14e-64MYB family protein