PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027362519.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family M-type_MADS
Protein Properties Length: 211aa    MW: 23976.3 Da    PI: 8.9358
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027362519.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF66.42.8e-211764249
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                    +i  ks  qvtfskRr g++KKA+EL++LC++e+a+i+fs+ +k + +
  XP_027362519.1 17 KIPKKSHLQVTFSKRRSGLFKKASELCTLCGVEIAIIVFSPADKAFSF 64
                    57789999*********************************9987655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MIKRKSSSGR QKIPIEKIPK KSHLQVTFSK RRSGLFKKAS ELCTLCGVEI AIIVFSPADK  60
AFSFGHPEVE SIIDCYLTRN SPLDQSTNQL VEAHRNLNMQ LTQILNQLDI EXKRGEELDR  120
AQKVRQRQFW WENLIDELGL HELQHLMFSM EELKKNVAQY ATKMLMEHTT ITGPGLNGFG  180
LCDAFTNKSL EIYANASSST IANAANLSFR N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.12e-52M-type_MADS family protein