PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027361048.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 644aa MW: 70100.6 Da PI: 4.9968

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027361048.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.3	2.4e-12	469	514	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ K++Ka+ L A+ YI +L XP_027361048.1 469 NHVEAERQRREKLNQRFYALRAVVPNV-----SKMDKASLLGDAISYITEL 514 799*********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 644 aa Download sequence
MNLWTDDNSS VMEAFMSSSD LSSIWPAPAP PQSTAVFNQD TLQQRLQALM EGARESWTYA 60 IFWQSSYDYA GSSLLGWGDG YYKGDDDKAK AKAKAKATSY ADQDYRKKVL RELNSLISGS 120 SAASSDDVDE EVTDTEWFFL VSMTQSFVNG GGLPGQAFFN SAPVWVTGAD RLSASPCERA 180 RQGQVFGLQT LVCIPSANGV VELGSTELIY QNSDLMNKVK VLFNFNSNLD VGSSWPLTAS 240 TADQGENDPS SLWLSDPEVR DSVNTVAATP SVSVSVSIPT NQGISKTMQF ETPGSSTLTE 300 TPSSVHTIHQ PSQNQSIFSR ELNFSEYGFD GKNGNSNQHS LKPESGEILS FGESKRNSFG 360 GVNGNSHFFS GQSQFVAAAE ENNTNTNNGK KRSPNSRGSN DDGMLSFTSG VILPATNLKS 420 TGGGGGDSDH SDLEASVVKD PDISTVVEPE KRPRKRGRKP ANGREEPLNH VEAERQRREK 480 LNQRFYALRA VVPNVSKMDK ASLLGDAISY ITELKSKLQS LESDKDGLQK QLDAVKQELE 540 KTTENSSSPN PTPNKSSNTA LIDLDIDVKI IGWDAMIRIQ CSKKNHPAAR LMAALMELDL 600 DVHHASVSVV NDLMIQQATV KMGSRFYTQE QLRSALSSKV GDVR

Sequence ? help Back to Top

Protein Sequence Length: 644 aa Download sequence

MNLWTDDNSS VMEAFMSSSD LSSIWPAPAP PQSTAVFNQD TLQQRLQALM EGARESWTYA  60
IFWQSSYDYA GSSLLGWGDG YYKGDDDKAK AKAKAKATSY ADQDYRKKVL RELNSLISGS  120
SAASSDDVDE EVTDTEWFFL VSMTQSFVNG GGLPGQAFFN SAPVWVTGAD RLSASPCERA  180
RQGQVFGLQT LVCIPSANGV VELGSTELIY QNSDLMNKVK VLFNFNSNLD VGSSWPLTAS  240
TADQGENDPS SLWLSDPEVR DSVNTVAATP SVSVSVSIPT NQGISKTMQF ETPGSSTLTE  300
TPSSVHTIHQ PSQNQSIFSR ELNFSEYGFD GKNGNSNQHS LKPESGEILS FGESKRNSFG  360
GVNGNSHFFS GQSQFVAAAE ENNTNTNNGK KRSPNSRGSN DDGMLSFTSG VILPATNLKS  420
TGGGGGDSDH SDLEASVVKD PDISTVVEPE KRPRKRGRKP ANGREEPLNH VEAERQRREK  480
LNQRFYALRA VVPNVSKMDK ASLLGDAISY ITELKSKLQS LESDKDGLQK QLDAVKQELE  540
KTTENSSSPN PTPNKSSNTA LIDLDIDVKI IGWDAMIRIQ CSKKNHPAAR LMAALMELDL  600
DVHHASVSVV NDLMIQQATV KMGSRFYTQE QLRSALSSKV GDVR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	451	459	KRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	0.0	bHLH family protein