PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027359563.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB_related

Protein Properties

Length: 476aa MW: 52387.5 Da PI: 5.5416

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027359563.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.3	6.5e-17	56	100	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+eE++++++a k++G g W+ I +++g ++t+ q++s+ qk+ XP_027359563.1 56 REKWTEEEHQKFLEALKLYGRG-WRQIEEHIG-TKTAVQIRSHAQKF 100 789*****************.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 476 aa Download sequence
MEMQDQIEGT RSTIFGTASN CLSNGGKQSE NVARIPSVGN SHTPKVRKPY TITKQREKWT 60 EEEHQKFLEA LKLYGRGWRQ IEEHIGTKTA VQIRSHAQKF FSKVVRESEG SAESSIQPIN 120 IPPPRPKRKP LHPYPRKSVD SFKGHTVPNE TEIFPSTNML VAEKDTRSPT SVLSTVGSEA 180 FGSAFSEQTT RCLSPNSCTT DIHSVSLSPV EKENDCMTSE PSEEEEKGPL ASVPLSTISN 240 PNICMKSEFS SKESECCKDA TANMPHITSI KLFGRTVSMV GNQKPLNIDD ENGEPIKSDE 300 VDDVENEKLG QSAESEQVET KLSLGSCGGD WHITADADGA NLTNIEPPKE NLCLSECALD 360 ASFPRWSLYQ GLPAFYLGPC NQVLNPMSLQ PSLKARTREE SSCTGSNTES VCDMENQGKN 420 SDAVDFECHK YHEGGGAPQK CARGFVPYKR CLAKRDGNSL IVAMEEREGQ RARVCS

Sequence ? help Back to Top

Protein Sequence Length: 476 aa Download sequence

MEMQDQIEGT RSTIFGTASN CLSNGGKQSE NVARIPSVGN SHTPKVRKPY TITKQREKWT  60
EEEHQKFLEA LKLYGRGWRQ IEEHIGTKTA VQIRSHAQKF FSKVVRESEG SAESSIQPIN  120
IPPPRPKRKP LHPYPRKSVD SFKGHTVPNE TEIFPSTNML VAEKDTRSPT SVLSTVGSEA  180
FGSAFSEQTT RCLSPNSCTT DIHSVSLSPV EKENDCMTSE PSEEEEKGPL ASVPLSTISN  240
PNICMKSEFS SKESECCKDA TANMPHITSI KLFGRTVSMV GNQKPLNIDD ENGEPIKSDE  300
VDDVENEKLG QSAESEQVET KLSLGSCGGD WHITADADGA NLTNIEPPKE NLCLSECALD  360
ASFPRWSLYQ GLPAFYLGPC NQVLNPMSLQ PSLKARTREE SSCTGSNTES VCDMENQGKN  420
SDAVDFECHK YHEGGGAPQK CARGFVPYKR CLAKRDGNSL IVAMEEREGQ RARVCS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18330.1	2e-50	MYB_related family protein