PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027359376.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MYB
Protein Properties Length: 335aa    MW: 37446.5 Da    PI: 5.7587
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027359376.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.41.6e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg WT+eEd +++ +v+ +G+g+W++++++ g++R++k+c++rw +yl
   XP_027359376.1 14 RGLWTPEEDAKILAYVANHGTGNWTLVPKKAGLNRCGKSCRLRWTNYL 61
                     788*******************************************97 PP
2Myb_DNA-binding47.63.8e-1569110346
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      ++T++E+el+++++   G++ W++Ia++++ gRt++++k++w++
   XP_027359376.1  69 SFTPQEEELIINLHGAIGSR-WSLIAKRLP-GRTDNDVKNYWNT 110
                      79******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MGRPPCCDKS NVKRGLWTPE EDAKILAYVA NHGTGNWTLV PKKAGLNRCG KSCRLRWTNY  60
LRPDLKHDSF TPQEEELIIN LHGAIGSRWS LIAKRLPGRT DNDVKNYWNT KLRKKLMKMG  120
IDPITHKPVS QVLSDLGNIS GLPNTSNQTG FSIVDHTQED QVDSWEHQVQ YQVTNLDNVQ  180
PHVFSEAASS TSSSSSSNLT QLSSPKSYSC QTQINPPCSS FDWSEFLHSD PFMWSEFQQL  240
QQCDLQRVVS SLNPSTLLQS EVELSNYTKS NGHDKHGAAS EDSEAVACDA SMEYQINKQC  300
EGHSSSGNSF VDGILDKDSE IRAAFPELLD PSFDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28470.13e-88MYB family protein