PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027359216.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

G2-like

Protein Properties

Length: 414aa MW: 46329.9 Da PI: 7.0179

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027359216.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.2	6.5e-32	231	284	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rFv+av+ LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_027359216.1 231 PRMRWTSSLHNRFVHAVALLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 284 9****************************************************7 PP
2	Myb_DNA-binding	47.4	4.4e-15	232	283	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ XP_027359216.1 232 RMRWTSSLHNRFVHAVALLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 283 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MPQNKIFHAP STNPIPDLSL HISLPNSAPS SICTDGDSPF DVWTQADTDG LKSHSDGSIK 60 GCPHTDTELS LANTTSTATH EVESTWRRRN FVRINNHGFS EGENTRLING IPLYSNFSSL 120 ENNIERDPSK FSSLYAVPYP SCVANSAPNY DNNGIIGGAA VEPISRFNGI TMESLRPQQF 180 RYFDFPHHQY HQHQQHHQFG NNNIGASDFS NGFLRSRMLS RQQSKRNMRA PRMRWTSSLH 240 NRFVHAVALL GGHERATPKS VLELMDVKDL TLAHVKSHLQ MYRTVKNTDK PAASSDGDGD 300 EDFMSLTLPL NQNKNFLPNQ RGPPNASIDH DIGYTSSNLW ANSSSSRGAR IQANSRDLEE 360 LNHQDIVSSQ HVGKLSEGSN YTQTRSFKDQ NLECQNPSLE ITLGRSNWHN DEHA

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MPQNKIFHAP STNPIPDLSL HISLPNSAPS SICTDGDSPF DVWTQADTDG LKSHSDGSIK  60
GCPHTDTELS LANTTSTATH EVESTWRRRN FVRINNHGFS EGENTRLING IPLYSNFSSL  120
ENNIERDPSK FSSLYAVPYP SCVANSAPNY DNNGIIGGAA VEPISRFNGI TMESLRPQQF  180
RYFDFPHHQY HQHQQHHQFG NNNIGASDFS NGFLRSRMLS RQQSKRNMRA PRMRWTSSLH  240
NRFVHAVALL GGHERATPKS VLELMDVKDL TLAHVKSHLQ MYRTVKNTDK PAASSDGDGD  300
EDFMSLTLPL NQNKNFLPNQ RGPPNASIDH DIGYTSSNLW ANSSSSRGAR IQANSRDLEE  360
LNHQDIVSSQ HVGKLSEGSN YTQTRSFKDQ NLECQNPSLE ITLGRSNWHN DEHA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	1e-49	G2-like family protein