PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027359175.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | GATA | ||||||||
Protein Properties | Length: 237aa MW: 26462 Da PI: 8.5768 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 54.1 | 2.1e-17 | 164 | 198 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C++C + Tp+WR gp g+ktLCnaCG++y++ +l XP_027359175.1 164 CTHCLAQRTPQWRAGPLGPKTLCNACGVRYKSGRL 198 *******************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MEWLSVFVED CFSSRPSCLL APTGVEATST STKPSSTMHR PQQNQCQLPN FAVPGKARSK 60 RKRLSAPRTK DTLNTWSQHL SPESDGLGAD PPLLKQAYWL ADSELIVPNK KDELEEVTKV 120 GELEEGEVME NSIVRKEKLG DCEVEVKNNN DNNNNGQHPI PRRCTHCLAQ RTPQWRAGPL 180 GPKTLCNACG VRYKSGRLLP EYRPAKSPTF VSYLHSNSHK KVMEMRMGAL SSIPAEH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32890.1 | 2e-41 | GATA family protein |