PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027359122.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MYB | ||||||||
Protein Properties | Length: 301aa MW: 33533.5 Da PI: 8.4694 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 60.3 | 4e-19 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEde lv++++++G g+W+t ++ g+ R++k+c++rw +yl XP_027359122.1 14 RGAWTPEEDEALVQYINKHGHGSWRTLPKQAGLLRCGKSCRLRWINYL 61 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 55.2 | 1.6e-17 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++TteE+ ++++++ +lG++ W++Ia+ ++ gRt++++k++w++ XP_027359122.1 67 RGPFTTEEENKIIQLHGMLGNR-WAAIASQIP-GRTDNEIKNYWNT 110 89********************.*********.***********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 301 aa Download sequence |
MGKAPCCDKH GVRRGAWTPE EDEALVQYIN KHGHGSWRTL PKQAGLLRCG KSCRLRWINY 60 LRPDIKRGPF TTEEENKIIQ LHGMLGNRWA AIASQIPGRT DNEIKNYWNT QLKKRLPNKL 120 GHSKGPQQYP FSPDHSIAKS ESPSTRHMVQ WESARVEAEA RLSMESALIN SWSTTETYPD 180 HFLQLWHSDV GKSFRMIKGK GVVCQSPLSQ ASSSSKLESC SDVSLQAKNT ANSAIANKSH 240 EQGSGYKAKL EDGTAGSESG YYEFLDTSDS ALNQLLDVPD SGIGFLGQNE SFLNTLYGRC 300 D |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61250.1 | 1e-93 | MYB family protein |