PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027359006.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MYB | ||||||||
Protein Properties | Length: 331aa MW: 36646 Da PI: 6.8968 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.5 | 3.1e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lv +++++G+g+Wk+++ g+ R+ k+c++rw +yl XP_027359006.1 14 KGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLSRCSKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.6 | 2.2e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T++E++ ++++ ++lG++ W++Ia++++ Rt++++k++w++yl XP_027359006.1 67 RGNFTEQEEKMIIHLQALLGNR-WAAIAAYLP-QRTDNDIKNYWNTYL 112 89********************.*********.*************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 331 aa Download sequence |
MGRPPCCDKE GVKKGPWTPE EDIILVSYIQ EHGPGNWKAV PTNTGLSRCS KSCRLRWTNY 60 LRPGIKRGNF TEQEEKMIIH LQALLGNRWA AIAAYLPQRT DNDIKNYWNT YLKKKLKKLE 120 AGCEGSFGHK EVSVSQPMSR GQWERRLQTD IHMAKKALSE ALSPNNTPAL LLPEPNSNQS 180 NDNSVSFYNS TKQATQSISY ASSADNIARL LKGWMKNAPT KASRAASAVT QNSFNNNLAG 240 ADTASSEGIT SGVAKGSTIS NSVELTETFE SLFGYESLDS SNSEFSQSLS PEATLFQDES 300 KPDATETDQI PFSLLEKWLL DDANCQEKLC F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G28910.1 | 1e-111 | MYB family protein |