PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027358660.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MYB
Protein Properties Length: 312aa    MW: 35343.6 Da    PI: 6.05
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027358660.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding568.9e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd +lv +++++G+g+W++++   g+ R+ k+c++rw +yl
   XP_027358660.1 14 KGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLSRCSKSCRLRWTNYL 61
                     79********************************************97 PP
2Myb_DNA-binding43.19.6e-1467112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++Tt+E+  ++++ ++lG++ W++Ia +++  Rt++++k++w+++l
   XP_027358660.1  67 RGNFTTQEEGMIIHLQALLGNK-WAAIACYLP-QRTDNDIKNYWNTHL 112
                      89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MVRPPCCDKV GIKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTNTGLSRCS KSCRLRWTNY  60
LRPGIKRGNF TTQEEGMIIH LQALLGNKWA AIACYLPQRT DNDIKNYWNT HLKKKLKNFQ  120
GVLDPHVGSD TTTTTGHHVS KIFNDRLNLN SNHASSSTYA SSSENISRLL EGWMRSSPMS  180
KGTQNIEHPS YNDCENNKLV KSSTVPTLNI ECCSNQTKDE KEGGDIVPHE EFDSILSFEN  240
QNNNAAWDKS TCDSMPERDS EECAEDKVQV MADKNRQRFD NINAPPLSIL EKWLLDENVA  300
QVEEIVELSP MF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08810.13e-87MYB family protein