PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027357382.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MYB | ||||||||
Protein Properties | Length: 310aa MW: 35550.2 Da PI: 5.2223 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.5 | 5.7e-17 | 21 | 68 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W+ eEd+ll ++++ +G g+W++ a + g++Rt+k+c++rw++yl XP_027357382.1 21 RGPWSLEEDDLLTNYIANHGEGRWNLLAIRSGLKRTGKSCRLRWLNYL 68 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 49.7 | 8.3e-16 | 74 | 117 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T eE++l+ +++ ++G++ W++Ia+ ++ gRt++++k++w++ XP_027357382.1 74 RGNLTSEEQLLIFELHSKWGNR-WSKIAQQLP-GRTDNEIKNYWRT 117 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 310 aa Download sequence |
MSTTPSKSLS CYYEDDSDLR RGPWSLEEDD LLTNYIANHG EGRWNLLAIR SGLKRTGKSC 60 RLRWLNYLKP DVKRGNLTSE EQLLIFELHS KWGNRWSKIA QQLPGRTDNE IKNYWRTRIQ 120 KQARYSKFDT DRLHTSRCLH KAQESFPSTM SIQNQAIPLS FDAVSHYSEF RTIATTQITC 180 EGAFLNEGGS NCLDQHEQNS DSEHNNGSCI SSSESVNIPN MSQNLGYNSS QFLALDNNSD 240 FGIDAYDGYK ANNCAYDMDA FNLTTTMDAK DLEYPVVDCQ LSESNWLNKE FACSTSNIDE 300 LWQFRNIQRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68320.1 | 1e-63 | MYB family protein |