PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027357292.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
|
||||||||
Family | MIKC_MADS | ||||||||
Protein Properties | Length: 236aa MW: 27791.1 Da PI: 8.6779 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 94.4 | 5.1e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 +rienk+nrqvtfskRr g+lKKA+ELSvLCdaeva+iifss+gkl+ yss XP_027357292.1 9 ERIENKINRQVTFSKRRSGLLKKAFELSVLCDAEVALIIFSSRGKLFQYSS 59 69***********************************************96 PP | |||||||
2 | K-box | 72.2 | 1.6e-24 | 77 | 170 | 4 | 98 |
K-box 4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 s+ + + ++++++++e+ kL++++e+L+r+qRh++Ge+Le+Ls+keLq+Le+qL+ l R+++++ l++ ++el++k ++l+e n++L++k XP_027357292.1 77 SQAGD-SFEHESQSYHEFLKLRAKYESLERTQRHFQGEELEPLSFKELQSLEKQLDITLALARQQQMKKLMARTDELREKVHNLEELNNQLQSKE 170 44443.4455677899****************************************************************************985 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 236 aa Download sequence |
MGRGRVVLER IENKINRQVT FSKRRSGLLK KAFELSVLCD AEVALIIFSS RGKLFQYSST 60 DVNKIIERYR QCRYNKSQAG DSFEHESQSY HEFLKLRAKY ESLERTQRHF QGEELEPLSF 120 KELQSLEKQL DITLALARQQ QMKKLMARTD ELREKVHNLE ELNNQLQSKE RDGFSDLVPD 180 NNNNIQLHDT QANHFESETT LNTWFRHHEA TSKGKIIDSG TEDNQRNHHK NNGWLQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G45650.1 | 2e-58 | MIKC_MADS family protein |