PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027356933.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 343aa MW: 38555.4 Da PI: 7.3151

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027356933.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.9	4.3e-17	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+ +++q+G+g +W + ++++g++R++k+c++rw++yl XP_027356933.1 14 KGPWSPEEDAKLKSYIEQHGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	38.7	2.4e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ XP_027356933.1 69 GGFSEEEDNIICSLYISIGSR-WSVIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAKLKSYIE QHGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEDNIIC SLYISIGSRW SVIAAQLPGR TDNDIKNYWN TRLKKKLLGK 120 HRKEQQARNK GNGVVKHESY SSSMVQENST QQQPYWPQIP LLPPMPYTNQ GPSFNDQDSI 180 RKLLIKLGGR FSDDYQPILD GLNLQFPDGC SPSSTQQNIH EEQIPVGSSC CMNSINNNEV 240 QFAQINEYCS DLMQGQGSFT AAIGEMVSTN YYPHRLSGLE FLYGEDMITD KIMCTSSTCG 300 QSTNWGETSS LMNPPIVASN YEGVRQEMPR ECSFQELSYP GAQ

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MGRAPCCDKA NVKKGPWSPE EDAKLKSYIE QHGTGGNWIA LPQKIGLKRC GKSCRLRWLN  60
YLRPNIKHGG FSEEEDNIIC SLYISIGSRW SVIAAQLPGR TDNDIKNYWN TRLKKKLLGK  120
HRKEQQARNK GNGVVKHESY SSSMVQENST QQQPYWPQIP LLPPMPYTNQ GPSFNDQDSI  180
RKLLIKLGGR FSDDYQPILD GLNLQFPDGC SPSSTQQNIH EEQIPVGSSC CMNSINNNEV  240
QFAQINEYCS DLMQGQGSFT AAIGEMVSTN YYPHRLSGLE FLYGEDMITD KIMCTSSTCG  300
QSTNWGETSS LMNPPIVASN YEGVRQEMPR ECSFQELSYP GAQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	6e-83	MYB family protein