PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027356829.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

ARF

Protein Properties

Length: 1122aa MW: 125344 Da PI: 6.2688

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027356829.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	71.6	1e-22	126	227	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+k+lt sd++++g +++p++ ae++ + +++ ++++ +d++ ++W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F +++ XP_027356829.1 126 FCKTLTASDTSTHGGFSVPRRAAEKIfppldfsM-QPPA-QEIVAKDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFI--RDE 216 99***************************954.4444.48**********************************************..557 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 +++l++++ r+ XP_027356829.1 217 KQQLLLGIKRA 227 88889988775 PP
2	Auxin_resp	124.8	5.8e-41	252	334	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaas++s+F+++YnPras+seFv++++k++kal+++vs+GmRf+m+fete+s rr++Gt++g+sdldpvrW+nS+Wr+L+ XP_027356829.1 252 AAHAASNNSPFTIFYNPRASPSEFVIPLAKYNKALYNQVSLGMRFRMMFETEESGVRRYMGTITGISDLDPVRWKNSQWRNLQ 334 79*******************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1122 aa Download sequence
MKAPPNGYLP NSGEGERKTI NSELWHACAG PLVSLPPAGS LVVYFPQGHS EQVAASMQKE 60 ADFIPSYPNL PSKLICMLHN VALHADPETD EVYAQMTLQP VNKYDKEAIL ASDMGLKQSQ 120 QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDNTWTFRH 180 IYRGQPKRHL LTTGWSVFVS TKRLFAGDSV LFIRDEKQQL LLGIKRANRQ QPALSSSVIS 240 SDSMHIGILA AAAHAASNNS PFTIFYNPRA SPSEFVIPLA KYNKALYNQV SLGMRFRMMF 300 ETEESGVRRY MGTITGISDL DPVRWKNSQW RNLQVGWDES TAGERPSRVS IWDIEPVVTP 360 FYICPPPFFR PKFPKQPGMP EDESDIENAF KRAMPWLGDD LGMKDASSSI FPGLSLVQWM 420 SMQQNNQFSA AQSGFIPPSM LSSNTLHGNL NTDDPSKLLN FQAPVLTAQN LQFNKPNLPN 480 QVNQLQQSPT SWPPQQQQQQ QQKLQSLLQT PLNQLQQQQQ QQQLSGQQNL PQTQQQQTQL 540 PQQRAQQPQQ PQQQQQQQQQ SCQQTIMNNG AVAANQIPNQ CVQSPVTYSQ FQQQQLLPGS 600 ISPQQSFQSA GKNQLLMTSL PQDSQFQQQI DQQASLLQRQ QQQQTQLQQS PLQLLQQSLS 660 QRAPQQPQMT QVSQQNTSEQ QPQLQFLQKL QQQQQQQQQL LSTSSSLLQS QLLEQQNTPQ 720 QNQQLPQLPV SQHQPQQLGN SGFSMEKLLN GNNFASAALM QTQQFPVNQP HHAQKSLTNT 780 RALSTLTDGD APSCSTSPST NNCQVSTPNL LKRNQQVTAT LGGPSVVEPT NNLMQELQSK 840 SEMQIKHEVP SVRGPDQLKY KGTMADQLET SSGTSYCIDP NNIHQNFPLP NFCMDGDVQS 900 HPRNNLPFGS NLDGLTPDTL LSRGYDSQKD LQNLLSNYGS APRDIETELS TAAISSQPFG 960 VPNMPFKPGC SSDIAINDTG VLNNGLWANQ TQRMRTYTKV QKCGSVGRCI DVTRYKGYDE 1020 LRHDLARMFG IEGQLEDPQR TEWKLVYVDH ENDILLVGDD PWEEFVSCVQ SIKILSSAEV 1080 QQMSLDGDLG HVPIPNQACS GTDNGNAWRG QYEDNSAASF NR

Sequence ? help Back to Top

Protein Sequence Length: 1122 aa Download sequence

MKAPPNGYLP NSGEGERKTI NSELWHACAG PLVSLPPAGS LVVYFPQGHS EQVAASMQKE  60
ADFIPSYPNL PSKLICMLHN VALHADPETD EVYAQMTLQP VNKYDKEAIL ASDMGLKQSQ  120
QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDNTWTFRH  180
IYRGQPKRHL LTTGWSVFVS TKRLFAGDSV LFIRDEKQQL LLGIKRANRQ QPALSSSVIS  240
SDSMHIGILA AAAHAASNNS PFTIFYNPRA SPSEFVIPLA KYNKALYNQV SLGMRFRMMF  300
ETEESGVRRY MGTITGISDL DPVRWKNSQW RNLQVGWDES TAGERPSRVS IWDIEPVVTP  360
FYICPPPFFR PKFPKQPGMP EDESDIENAF KRAMPWLGDD LGMKDASSSI FPGLSLVQWM  420
SMQQNNQFSA AQSGFIPPSM LSSNTLHGNL NTDDPSKLLN FQAPVLTAQN LQFNKPNLPN  480
QVNQLQQSPT SWPPQQQQQQ QQKLQSLLQT PLNQLQQQQQ QQQLSGQQNL PQTQQQQTQL  540
PQQRAQQPQQ PQQQQQQQQQ SCQQTIMNNG AVAANQIPNQ CVQSPVTYSQ FQQQQLLPGS  600
ISPQQSFQSA GKNQLLMTSL PQDSQFQQQI DQQASLLQRQ QQQQTQLQQS PLQLLQQSLS  660
QRAPQQPQMT QVSQQNTSEQ QPQLQFLQKL QQQQQQQQQL LSTSSSLLQS QLLEQQNTPQ  720
QNQQLPQLPV SQHQPQQLGN SGFSMEKLLN GNNFASAALM QTQQFPVNQP HHAQKSLTNT  780
RALSTLTDGD APSCSTSPST NNCQVSTPNL LKRNQQVTAT LGGPSVVEPT NNLMQELQSK  840
SEMQIKHEVP SVRGPDQLKY KGTMADQLET SSGTSYCIDP NNIHQNFPLP NFCMDGDVQS  900
HPRNNLPFGS NLDGLTPDTL LSRGYDSQKD LQNLLSNYGS APRDIETELS TAAISSQPFG  960
VPNMPFKPGC SSDIAINDTG VLNNGLWANQ TQRMRTYTKV QKCGSVGRCI DVTRYKGYDE  1020
LRHDLARMFG IEGQLEDPQR TEWKLVYVDH ENDILLVGDD PWEEFVSCVQ SIKILSSAEV  1080
QQMSLDGDLG HVPIPNQACS GTDNGNAWRG QYEDNSAASF NR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein